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Name : tkt (CMS_1978) Accession : YP_001710671.1 Strain : Clavibacter michiganensis ATCC33113 Genome accession: NC_010407 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : 2.2.1.1 Position : 2089866 - 2091947 bp Length : 2082 bp Strand : + Note : catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during expo DNA sequence : TTGCAATGGGACCCCATCGACAGCAAGGCGGTCGACACCGCACGGATCCTCGCCGCGGACGCGGTGGAGAAGGTCGGAAA CGGTCACCCCGGCACCGCCATGAGCCTGGCCCCGGCGGCCTACCTCCTGTTCCAGAAGGTCATGCGCCGCGACCCGTCCG ACAGCACCTGGATCGGTCGCGACCGGTTCATCCTCTCGGTGGGCCACAGCTCGCTCACGCAGTACACGCAGTTCTTCCTC GGCGGCTACGGCCTCGAGATCGAGGACCTCCAGGCCCTCCGCACGTGGGACTCCAAGACCCCGGGCCACCCGGAGTACGG GCACACCGACGGCGTCGAGATCACCACCGGCCCGCTCGGCCAGGGCCTCGCCTCCTCCGTGGGCTTCGCCTACGCCGCCC GCTACGAGCGCGGCCTCTTCGACCCCGAGACCCCCGCCGGCGAGAGCCCCTTCGACCACTTCGTGTACGTGATCGCCGGC GACGGCGACATGCAGGAGGGCATCACCTCCGAGGCCTCCTCCCTCGCGGGGCACCAGGAGCTCGGCAACCTCATCGCGAT CTACGACAGCAACCAGATCTCCATCGAGGACGACACCGACATCGCCTTCACCGAGGACGTCGCCGCGCGCTACGAGGCCT ACGGCTGGCACGTGCAGCACGTCGACTGGAAGAAGACCGGCGAGTACGTCGAGGACGTGCAGGAGCTGTTCGACGCCGTC GAGGCCGCCAAGGCCGAGACGCGCAAGCCGTCGCTCATCATCCTCAAGACGATCATCGGCTGGCCGTCCCCGAAGAAGCA GAACTCGGGCAAGATCCACGGCTCCGCGCTCGGCGCCGAGGAGCTCGCGGCCGTCAAGCAGATCGTCGGCTTCGACCCCG AGAAGAGCTTCGAGGTGCCGGACGGCGTCCTCGAGCACACCCGCCAGGCCGTCGAGCGCGGCCAGCAGCAGCACCGCGAG TGGGACGAGAAGCTCGCCGCGTGGGCCGAGGCGAACCCCGAGCGCAAGACGCTGCTCGACCGCGTCCTCGCCGGCGACGC CCCCGAGGGCCTCGACGAGGCGCTCCCCGTGTTCCCCGCGGGCAAGGACGTCTCGACGCGCGCCGCGTCCGGCAAGGTCA TCAACGCCATCGCCGAGGTCATGCCCGAGCTGTGGGGCGGCTCCGCCGACCTCGCCGAGTCGAACAACACGACCATCGAG TCGGCGCCGTCCTTCGTGCCCGCCGAGCGCTCGACCGGCATGTGGAAGGGCGAGCCCTACGGCCGCGTCCTCCACTTCGG CATCCGCGAGCACGCCATGGGCGCGATCCTCAACGGCATCGTCCTGCACGGCAACACGCGTCCGTTCGGCGGCACGTTCC TCATCTTCAGCGACTACATGCGCCCGGCGGTCCGTCTCGCCGCGCTCATGAAGGCGCCGTCGATCTTCGTCTGGACGCAC GACTCGGTCGCCCTCGGCGGCGACGGGCCGACCCACCAGCCGGTGGAGCAGCTCGCCAGCCTCCGCGCCATCCCGGGCCT CGACGTCATCCGCCCCGCGGACGCCAACGAGACCGCGCAGGCGTGGAAGACGATCCTCACCCGTCGCATGGGCCCCGCGG GCCTGGCGCTCTCGCGCCAGAACCTCCCGGTGCTCGAGCGCGGCACGGGCGACGCCACGGCCACCGAGTACGCCTCGGCC GCCGGCGTCGCCAAGGGCGCGTACATCCTCGCCGACACCGAGGGCACGCCCGACGTCATCCTCATCGCCACGGGCTCCGA GGTCCAGTTCGCCGTCGAGGCCCGCGAGGCCCTCGCCGCGGACGGCATCAAGGCCCGCGTCGTCAGCGCCCCGAGCCTCG AGTGGTTCGAGGAGCAGGACGCCGCGTACAAGGAGCACGTGCTCCCCGAGGCGGTCGCCGCGCGCGTGTCCGTCGAGGCG GGCATCTCGCTCTCCTGGAAGCAGTACGTCGGGCACCACGGCCGCAGCATCTCGATCGAGCACTTCGGCGCGAGCGCCGA GTACGAGGTCCTGTACCGCGAGTTCGGCATCACCACGGAGGCCGTCGTCACAGCGGCCAAGGAGTCCATCGCCTCCCTCT AG Protein sequence : MQWDPIDSKAVDTARILAADAVEKVGNGHPGTAMSLAPAAYLLFQKVMRRDPSDSTWIGRDRFILSVGHSSLTQYTQFFL GGYGLEIEDLQALRTWDSKTPGHPEYGHTDGVEITTGPLGQGLASSVGFAYAARYERGLFDPETPAGESPFDHFVYVIAG DGDMQEGITSEASSLAGHQELGNLIAIYDSNQISIEDDTDIAFTEDVAARYEAYGWHVQHVDWKKTGEYVEDVQELFDAV EAAKAETRKPSLIILKTIIGWPSPKKQNSGKIHGSALGAEELAAVKQIVGFDPEKSFEVPDGVLEHTRQAVERGQQQHRE WDEKLAAWAEANPERKTLLDRVLAGDAPEGLDEALPVFPAGKDVSTRAASGKVINAIAEVMPELWGGSADLAESNNTTIE SAPSFVPAERSTGMWKGEPYGRVLHFGIREHAMGAILNGIVLHGNTRPFGGTFLIFSDYMRPAVRLAALMKAPSIFVWTH DSVALGGDGPTHQPVEQLASLRAIPGLDVIRPADANETAQAWKTILTRRMGPAGLALSRQNLPVLERGTGDATATEYASA AGVAKGAYILADTEGTPDVILIATGSEVQFAVEAREALAADGIKARVVSAPSLEWFEEQDAAYKEHVLPEAVAARVSVEA GISLSWKQYVGHHGRSISIEHFGASAEYEVLYREFGITTEAVVTAAKESIASL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 4e-123 | 45 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 1e-122 | 44 |
