Gene Information

Name : CMS_1912 (CMS_1912)
Accession : YP_001710610.1
Strain : Clavibacter michiganensis ATCC33113
Genome accession: NC_010407
Putative virulence/resistance : Unknown
Product : insertion element ISCmi2 transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3415
EC number : -
Position : 2028542 - 2029504 bp
Length : 963 bp
Strand : -
Note : N

DNA sequence :
GTGACTCACGCTAATGCCCCGTTCGCTCCCGTGGGCAGGGTTCGGCTTGCTCGGTTGATCGTTGAGGACGGGTGGCCGGT
CCGGCGTGCGGCGGAGAGGTTCCAGTGCTCGCCGGCGACGGCGTCGAGATGGGCTCGCCGGTATCGGGCCGGGTTGCCGA
TGACAGATCGCTCATCCCGTCCGCACCGTCAGCCCGGGCGCACGAGTCGGCGTCGGGAGCGGCGGATCGTCGCGCTGAGA
TTCACTCGCCGGTGGGGCCCGCACCGCATCAGCTACCACCTGCGTATCCCCCGTTCCACGGTCGAGCGGGTCCTCCGTCG
CTACCGGATGCCGTTGCTCACGCACCTGGATTCCGCGACGGGACTCCCCGTCCGACGCTCGCCCGCGCGACGTTACGAGC
ACTCCTCGCCGGGAGATCTGGTCCACGTCGACATCAAGAAGCTCGGCCGCATCCCGGACGGCGGCGGGCACCGAGTCCTC
GGCAGAGCGGCCGGCCGGAGGAACACTCCCCGGACCGGGCGGGGGTACGCGTTCCTGCACCACGCCGTGGATGACCACTC
CCGACTGGCGTACTCCGAGATCCTCACCGACGAGCGCAAGGAGACCGCTGCCGCGTTCTGGGCCCGCGCGAACGCGTTCT
TCACCACCGCGGGCATCACCGTGATCCGTGTCCTGACGGACAACGGCTCCTGCTACCGCTCCCACGCCTTCACCGAGGCG
CTCGGATCGATCACGCACAAACGCACCCGCCCCTACCGGCCCCAGACCAACGGGAAGGTCGAGCGCTTCAACCGCACCCT
CGCCACGGAATGGGCCTACGCCCATCCCTATCGCACCGACGAGGCCCGCGCCGCGACCTACCCTGCCTGGCTGCATCACT
ACAACCACCACCGCCCCCACACCGGCATCGGCGGACTCACGCCCGCCGAACGCGTTCACAACCTCACTGGGAACTACAGC
TAG

Protein sequence :
MTHANAPFAPVGRVRLARLIVEDGWPVRRAAERFQCSPATASRWARRYRAGLPMTDRSSRPHRQPGRTSRRRERRIVALR
FTRRWGPHRISYHLRIPRSTVERVLRRYRMPLLTHLDSATGLPVRRSPARRYEHSSPGDLVHVDIKKLGRIPDGGGHRVL
GRAAGRRNTPRTGRGYAFLHHAVDDHSRLAYSEILTDERKETAAAFWARANAFFTTAGITVIRVLTDNGSCYRSHAFTEA
LGSITHKRTRPYRPQTNGKVERFNRTLATEWAYAHPYRTDEARAATYPAWLHHYNHHRPHTGIGGLTPAERVHNLTGNYS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnp7109-27 YP_001800924.1 transposase for insertion sequence Not tested Not named Protein 5e-50 52
CDBH8_0912 YP_005160004.1 transposase-like protein Not tested Not named Protein 8e-54 52