Gene Information

Name : CMS_1855 (CMS_1855)
Accession : YP_001710561.1
Strain : Clavibacter michiganensis ATCC33113
Genome accession: NC_010407
Putative virulence/resistance : Unknown
Product : insertion element ISCmi2 transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3415
EC number : -
Position : 1964344 - 1965306 bp
Length : 963 bp
Strand : +
Note : Nu/R

DNA sequence :
GTGACTCACGCTAACGCCCCGTTCACTCCCGCGGGCAGGCTTCGGCTTGCCCGGTTGATCATCGAGGACGGGTGGCCGGT
CCGGCGTGCGGCGGAGAGGTTCCAGTGCTCGCCGGCGACGGCGTCGAGATGGGCTCGCCGGTATCGGGCCGGGTTGCCGA
TGACGGACCGCTCATCCCGCCCGCACCGGCAACCGACCCGCACGAGTCAGCGTCGGGAGCGGCGGATCATCGCGCTGAGA
TTCACTCGCCGGTGGGGCCCGCACCGCATCAGCTATCACCTCCGCGTTCCGCGTTCGACGGTCGAGCGGGTGCTGAACCG
GTATCGGATGCCGTTGCTCGAGCACGTCGATCTGAGCACCGGGCTCCCTGCCCGGCGGTCTCCTGCCCGACGCTACGAGC
ACTCCTCGCCGGGAGATCTGGTCCACGTCGACATCAAGAAGCTCGGCCGCATCCCGGACGGCGGCGGGCACCGAGTCCTC
GGCAGAGCGGCCGGCCGGAGGAACACTCCCCGGACCGGGCGGGGATACGCGTTCCTGCATCACGCCGTGGATGACCACTC
CCGACTGGCGTACTCCGAGATCCTCACCGACGAGCGCAAGGAGACCGCTGCCGCGTTCTGGGCCCGCGCGAACGCGTTCT
TCACCGCCGCGGGCATCACCGTGATCCGTGTCCTGACGGACAACGGCTCCTGCTACCGCTCCCACGCCTTCACCGAGGCG
CTCGGCACCATCGCCCACACACGCACCCGCCCGTACCGGCCCCAGACGAACGGGAAGGTCGAGCGCTTCAACCGCACCCT
CGCCACGGAATGGGCTTACGCCCATCCCTATCGCACCGACGAGGCCCGCGCCGCGACCTACCCTGCCTGGCTGCATCACT
ACAACCACCACCGCCCCCACACCGGCATCGGCGGACTCACGCCCGCCGAACGCGTTCACAACCTCACTGGGAACTACACC
TAG

Protein sequence :
MTHANAPFTPAGRLRLARLIIEDGWPVRRAAERFQCSPATASRWARRYRAGLPMTDRSSRPHRQPTRTSQRRERRIIALR
FTRRWGPHRISYHLRVPRSTVERVLNRYRMPLLEHVDLSTGLPARRSPARRYEHSSPGDLVHVDIKKLGRIPDGGGHRVL
GRAAGRRNTPRTGRGYAFLHHAVDDHSRLAYSEILTDERKETAAAFWARANAFFTAAGITVIRVLTDNGSCYRSHAFTEA
LGTIAHTRTRPYRPQTNGKVERFNRTLATEWAYAHPYRTDEARAATYPAWLHHYNHHRPHTGIGGLTPAERVHNLTGNYT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnp7109-27 YP_001800924.1 transposase for insertion sequence Not tested Not named Protein 9e-50 52
CDBH8_0912 YP_005160004.1 transposase-like protein Not tested Not named Protein 2e-53 51