Gene Information

Name : CMS_1824 (CMS_1824)
Accession : YP_001710531.1
Strain : Clavibacter michiganensis ATCC33113
Genome accession: NC_010407
Putative virulence/resistance : Unknown
Product : insertion element IS1121/Cmi2 chimera transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3415
EC number : -
Position : 1929598 - 1930545 bp
Length : 948 bp
Strand : -
Note : Nu/R

DNA sequence : 
GTGACTCACGCTAACGCCCCGTTCACTCCCGCGGGCAGGCTTCGGCTTGCCCGGTTGATCATCGAGGACGGGTGGCCGGT
CCGGCGTGCGGCGGAGAGGTTCCAGTGCTCGCCGGCGACGGCGTCGAGATGGGCTCGCCGGTATCGGGCCGGGTTGCCGA
TGACGGACCGGTCATCCCGTCCGCACCGTCAGCCCGGGCGCACGAGTCGGCGTCGGGAGCGGCGGATCGTCGCGCTGAGA
TTCACTCGCCGGTGGGGCCCGCACCGCATCAGCTACCACCTGCGTATCCCCCGTTCCACGGTCGAGCGGGTCCTCCGTCG
CTACCGGATGCCGTTGCTCACGCACCTGGATTCCGCGACGGGACTCCCCGTCCGACGCTCGCCCGCGCGACGTTACGAGC
ACTCCTCGCCGGGAGATCTGGTCCACGTCGACATCAAGAAGCTCGGCCGTATCCCGGACGGCGGCGGGCACCGAGTCCTC
GGCCGACAGGCCGGCCGGAAGAACAACCCCCGGACCGGACGGGGGTACGCGTTCCTGCACCACGCCGTGGATGACCACTC
CCGACTGGCGTACTCCGAGATCCTCACCGACGAGCGCAAGGAGACCGCTGCCGCGTTCTGGGCCCGCGCGAACGCGTTCT
TCACCGCCGCGGGCATCACCGTGATCCGTGTCCTGACGGACAACGGCTCCTGCTACCGCTCCCACGCCTTCACCGAGGCG
CTCGGCACCATCGCCCACACACGCACCCGCCCGTACCGGCCCCAGACGAACGGGAAGGTCGAGCGCTTCAACCGCACCCT
CGCCACCGAGTGGGCCTACCGGCAACCCTTCACCAGCAACCAACACCGGGCCGACGCGCTTGACCCCTTCATCGAGCACT
ACAACACTGAACGAATCCACTCAAGCCACGGGCTCACGCCCGCGGCCCGAGTGTCACCAACGTCATGA

Protein sequence : 
MTHANAPFTPAGRLRLARLIIEDGWPVRRAAERFQCSPATASRWARRYRAGLPMTDRSSRPHRQPGRTSRRRERRIVALR
FTRRWGPHRISYHLRIPRSTVERVLRRYRMPLLTHLDSATGLPVRRSPARRYEHSSPGDLVHVDIKKLGRIPDGGGHRVL
GRQAGRKNNPRTGRGYAFLHHAVDDHSRLAYSEILTDERKETAAAFWARANAFFTAAGITVIRVLTDNGSCYRSHAFTEA
LGTIAHTRTRPYRPQTNGKVERFNRTLATEWAYRQPFTSNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnp7109-27 YP_001800924.1 transposase for insertion sequence Not tested Not named Protein 5e-44 49
CDBH8_0912 YP_005160004.1 transposase-like protein Not tested Not named Protein 7e-48 49