Gene Information

Name : join (CMS_1765)
Accession : YP_001710471.1
Strain : Clavibacter michiganensis ATCC33113
Genome accession: NC_010407
Putative virulence/resistance : Unknown
Product : insertion element IS1121 transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2826
EC number : -
Position : 1862912 - 1863875 bp
Length : 964 bp
Strand : -
Note : Nu

DNA sequence :
ATGTCCCATCGCTAATGCCCGGTTGACTGTTCATGGTCGGCTTCTCCTCGTGCGTCGGGTAGTCGAGGATCGTCGTCCGG
TGTCGCATGTGGCTCGCGAGCTCGGGGTGTCGCGTCAGTGCGCGCATCGGTGGGTGGCCCGGTTCCGTCAGGAGGGTGTC
GCGGGGCTCGCGGATCGGTCCTCGAGACCACGGTCGATGCCGGCGAGGACGAGTCCGGAACAGGAAGGCGCCGTGCTGGC
TGCGCGCGCGGAACTTCGGTTCGGGCCCGCCCGGCTGGCTCCGGTGACGAGCGTTCCGGCCCGTACGATCTCCCGCATCC
TGCGCCGGCACGGGGCGCCGCCGTTGGCATGGTTGGACCCCGTCACCGGGGCCGTGATCCGGGCATCCCGGTCAACGGCG
CACCGGTATGAGCACGAGCATCCGGGTGATCTGATCCACGTGGACGTGAAGAAGCTCGGGAGGATCCCGGACGGAGGCGG
CTGGCGGGTCCACGGGCGCAGCGAGCAGGTCCGCGGCCGCGGGATCGGGTTCGATTACGTCCATGCCGCGGTCGATGACC
ACACCCGTCTCGCCTACGCGGAGATCCATCCCGATGAGAAAGGCGCGACCGCGGCCGGGTTCCTGACCCGCGCAGCGGCG
TACTTCGCCGGGCATGGGATCACCCGGATCGAGCGGGTCATCACGGACAACGCGTTCGCCTACCGGCACTCGACCGCGTT
CAAGAACGCCGTCCAGGACCTGGGCGCGCGGCAGAAGTTCATCCGCCCGCACTGCCCCTGGCAGAACGGCAAGGTCGAGC
GCTTCAACCGGACCCTCGCGACCGAGTGGGCCTACCGGCAACCCTTCACCAGCAACCAACACCGCGCCGACGCGCTTGAC
CCCTTCATCGAGCACTACAACACTGAACGAATCCACTCAAGCCACGGGCTCACGCCCGCGGCCCGAGTGTCACCAACGTC
ATGA

Protein sequence :
MSHRNARLTVHGRLLLVRRVVEDRRPVSHVARELGVSRQCAHRWVARFRQEGVAGLADRSSRPRSMPARTSPEQEGAVLA
ARAELRFGPARLAPVTSVPARTISRILRRHGAPPLAWLDPVTGAVIRASRSTAHRYEHEHPGDLIHVDVKKLGRIPDGGG
WRVHGRSEQVRGRGIGFDYVHAAVDDHTRLAYAEIHPDEKGATAAGFLTRAAAYFAGHGITRIERVITDNAFAYRHSTAF
KNAVQDLGARQKFIRPHCPWQNGKVERFNRTLATEWAYRQPFTSNQHRADALDPFIEHYNTERIHSSHGLTPAARVSPTS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnp7109-27 YP_001800924.1 transposase for insertion sequence Not tested Not named Protein 5e-30 42
CDBH8_0912 YP_005160004.1 transposase-like protein Not tested Not named Protein 1e-34 42