|
Name : CMS_1524 (CMS_1524) Accession : YP_001710250.1 Strain : Clavibacter michiganensis ATCC33113 Genome accession: NC_010407 Putative virulence/resistance : Unknown Product : nucleotide-sugar dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1004 EC number : - Position : 1606383 - 1607696 bp Length : 1314 bp Strand : - Note : - DNA sequence : GTGCGCATCTCCGTCATCGGCTGCGGCTACCTCGGCACCGTCCACGCCGCGTGCATGAGCCGCCTCGGGCACGACGTGGT CGCGATCGACGTGGACGCCGCGAAGATCGCGTCCCTGCAGACGGGCGTCGCCCCGTTCTTCGAGCCGGGCCTGCCGGATC TCCTCACCGAGCAGCTCGCGACCGGCCGCCTCCGCTTCACCACCGACACGGCCGAGGCCGCCGGTTCCCGCGTGCACTTC ATCGCCGTCGGCACGCCGCAGAAGCGCGGCGAGAACGCCGCGGACATGACCTACGTCGACGCCGCGGTCGAGGCGCTGAT CCCCCACCTCGCGCCGGGCGACGTGGTCACCGGCAAGTCCACCGTGCCCGTCGGCACCGCGCGGCGGCTCGCGGAGCGGA TCGACGCGCGCGTGCCCGGCGCGACGCTCGTGTGGAACCCCGAGTTCCTGCGCGAGGGATTCGCGGTCGAGGACACGCTC ACGCCCGACCGCTTCGTCTACGGCCTGCCCACGGGAGATGCTGGCGAGGCCGCGCGGGCGGCGCTCGACGAGGTCTACGC CACCGCGATCGGCACCGGCACGGCGCGCGTCACGACCGACTACGAGACCGCCGAGCTCGTGAAGGTGTCGGCGAACGCGT TCCTCGCCACCAAGATCTCCTTCATCAACGCCATGGCGGAGGTGTGCGAGGCCACCGGTGCCGACGTCACCCAGCTCGCG GACGCCATCGGGTACGACGACCGCATCGGCCGCCGCTTCCTCAACGCCGGCATCGGCTTCGGCGGCGGCTGCCTCCCCAA GGACATCCGGGCGTTCATGGCGCGCGCGGGCGAGCTCGGCGCGGACCAGGCGCTCACGTTCCTCCGCGAGGTCGACTCCA TCAACATGCGGCGGCGCGTGCGGGCGGTCGACGTGGCGCGGGAGGTGTGCGGCGGATCCCTGCTCGGCCGCAACATCGCC GTGCTCGGGCTCGCCTTCAAGCCCGAGTCGGACGACGTGCGCGACTCCCCCGCGCTCAGCATCTCCGCGCAGCTGCAGCT GCAGGGCGCGCGCGTGCTCGCGACGGATCCGTACGCCAACGAGAACTCGCGCCGCCGCTTCCCGGAGCTCACCTACGTCG ACTCGTGGCAGGAGGCGGCACGCGACGCCGACGCCGTCATGGTGCTCACGGAGTGGAAGCAGTACCGGGCCATCGACCCG GCGGAGCTCAAGGCCATCGTGGCGACGCCCGTGATCGTCGACGGCCGCAACTGCCTGGATCCCGTCGCGTGGCGCGCCGC CGGCTGGCGCTACCGCGGGATGGGCCGGCCCTAG Protein sequence : MRISVIGCGYLGTVHAACMSRLGHDVVAIDVDAAKIASLQTGVAPFFEPGLPDLLTEQLATGRLRFTTDTAEAAGSRVHF IAVGTPQKRGENAADMTYVDAAVEALIPHLAPGDVVTGKSTVPVGTARRLAERIDARVPGATLVWNPEFLREGFAVEDTL TPDRFVYGLPTGDAGEAARAALDEVYATAIGTGTARVTTDYETAELVKVSANAFLATKISFINAMAEVCEATGADVTQLA DAIGYDDRIGRRFLNAGIGFGGGCLPKDIRAFMARAGELGADQALTFLREVDSINMRRRVRAVDVAREVCGGSLLGRNIA VLGLAFKPESDDVRDSPALSISAQLQLQGARVLATDPYANENSRRRFPELTYVDSWQEAARDADAVMVLTEWKQYRAIDP AELKAIVATPVIVDGRNCLDPVAWRAAGWRYRGMGRP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| udgA | YP_003784334.1 | UDP-glucose 6-dehydrogenase | Not tested | PiCp 7 | Protein | 1e-69 | 49 |
| udgA | YP_005686369.1 | UDP-glucose 6-dehydrogenase | Not tested | PiCp 7 | Protein | 1e-69 | 49 |
| udgA | YP_005682185.1 | UDP-glucose 6-dehydrogenase | Not tested | PiCp 7 | Protein | 1e-69 | 49 |
