Gene Information

Name : CMS_1515 (CMS_1515)
Accession : YP_001710242.1
Strain : Clavibacter michiganensis ATCC33113
Genome accession: NC_010407
Putative virulence/resistance : Unknown
Product : insertion element ISCmi2 transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3415
EC number : -
Position : 1599226 - 1600188 bp
Length : 963 bp
Strand : +
Note : N/R

DNA sequence :
GTGACTCACGCTAATGCCCCGTTCGCTCCCGTGGGCAGGCTTCGGCTTGCTCGGTTGATCGTTGAGGACGGGTGGCCGGT
CCGGCGTGCGGCGGAGAGGTTCCAGTGCTCGCCGGCGACGGCGTCGAGATGGGCTCGCCGGTATCGGGCCGGGTTGCCGA
TGACGGATCGCTCATCCCGCCCGCACCGGCAACCGACCCGCACGAGTCAGCGTCGGGAGCGGCGGATCGTCGCGCTCAGA
TTCACCCGCAGGTGGGGCCCGCACCGCATCAGCTATCACCTCCGCGTTCCGCGTTCGACGGTCGAGCGGGTGCTGAACCG
GTATCGGATGCCGTTGCTCGAGCACGTCGATCTGAGCACCGGGCTCCCTGCCCGGCGGTCTCCTGCCCGACGCTACGAGC
ACTCCTCGCCGGGAGATCTGGTCCACGTCGACATCAAGAAGCTCGGCCGCATCCCGGACGGCGGCGGGCACCGAGTCCTC
GGCAGAGCGGCCGGCCGGAGGAACACTCCCCGGACCGGACGGGGGTACGCGTTCCTGCACCACGCCGTGGATGACCACTC
CCGACTGGCGTACTCCGAGATCCTCACCGACGAGCGCAAGGAGACCGCTGCCGCGTTCTGGGCCCGCGCGAACGCGTTCT
TCACCGCCGCGGGCATCACCGTGATCCGTGTCCTGACGGACAACGGCTCCTGCTACCGCTCCCACGCCTTCACCGAGGCG
CTCGGCACCATCGCCCACACACGCACCCGCCCCTACCGGCCCCAGACCAACGGGAAGGTCGAGCGCTTCAACCGCACCCT
CGCCACCGAGTGGGCCTACGCCCATCCCTATCGCACCGACGAGGCCCGCGCCGCGACCTACGACGCCTGGCTGCATCACT
ACAACCACCACCGCCCCCACACCGGCATCGGCGGACTCACGCCCGCCGAACGCGTTCACAACCTCACTGGGAACTACACC
TAG

Protein sequence :
MTHANAPFAPVGRLRLARLIVEDGWPVRRAAERFQCSPATASRWARRYRAGLPMTDRSSRPHRQPTRTSQRRERRIVALR
FTRRWGPHRISYHLRVPRSTVERVLNRYRMPLLEHVDLSTGLPARRSPARRYEHSSPGDLVHVDIKKLGRIPDGGGHRVL
GRAAGRRNTPRTGRGYAFLHHAVDDHSRLAYSEILTDERKETAAAFWARANAFFTAAGITVIRVLTDNGSCYRSHAFTEA
LGTIAHTRTRPYRPQTNGKVERFNRTLATEWAYAHPYRTDEARAATYDAWLHHYNHHRPHTGIGGLTPAERVHNLTGNYT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnp7109-27 YP_001800924.1 transposase for insertion sequence Not tested Not named Protein 6e-49 51
CDBH8_0912 YP_005160004.1 transposase-like protein Not tested Not named Protein 1e-52 51