|
Name : CMS_1399 (CMS_1399) Accession : YP_001710126.1 Strain : Clavibacter michiganensis ATCC33113 Genome accession: NC_010407 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : R : General function prediction only COG ID : COG2409 EC number : - Position : 1468227 - 1471169 bp Length : 2943 bp Strand : + Note : - DNA sequence : ATGGCCACGCTTCTGTACCGGCTCGGCCGGATCTCGTTCCTCCACCCGTGGCGCGTCGTCGCCGCGTGGATCCTCGTCCT CGGCATCCTGCTCGGCGGCGGCCTCGCGCTCGGCGGCAAGACCCAGGAGTCGTTCTCGATCCCGGGCACCGAGTCGCAGG AGGTCATCGACCGGCTCGCCGCCGTGTTCCCGCAGGCCGCGGGCGCGAGCGCGCAGATCGTGACCGAGGCACCGGCCGGC GCGAAGGTCACCGACGACGCCGACAAGGCCGCGATCGAGGCGACCGCGAAGGCCGCGGGCGAGGTCGACGGCGTCGCGAC GGCGCTCTCGCCCTTCTCCGAGTACGCGAGCGACGCCGTGTCCGACGACGGCACCGTGGCGATCACGACCGTGCAGTTCT CCGGGCAGAGCGACCAGGTGACCACCGCGACGCTCGACGCGCTGAAGGAGTCGGCGCAGGCGGCCGAGGACGCGGGGCTC ACGGTCTCGTTCGGCGGCCAGGTCTTCCAGGACATCCACTACGGAGTGACCGTGACGGAGGCGTTCGGCGTGCTCTTCGC GGGCCTCGTGCTCGTGCTCACCTTCGGCTCGATGCTCGCGGCCGGGCTGCCGCTCATCGGCGCGCTGGTCGGGGTGGCCG CGTCCGCGGGCGCGCTGCTGGCCGCGTCGAAGTTCGTCACGGTGTCGAGCGCGTCGCCGCTGCTCGCGGTGATGATCGGC CTCGCGGTCGGCATCGACTACGCGCTCTTCATCCTCATGCGGCACCGCACGCAGCTCGCCAACGGCATGCCCGTCGAGCG CTCGGCGTCGACCGCGGTGGCGACGGCAGGCAGCGCCGTGATCTTCGCGGGCGTGACGGTGATCATCGCGCTGCTGGGGC TCCTCGTGGTGCAGATCCCGTTCCTCACGGTGATGGGACTCGGCGCGGCGTTCGCGGTGCTGCTCGCCATGGGCGTCGCG ACGACCCTGCTGCCGGCGATGCTCGGCCTCGCGGGGGAGCGCCTCCGGCCGAAGGAGGGCTCGCGGGCCGCCCGCCGCGC GAAGGCGCAGTCCGAGGGGACGCAGCGCACGCTCGGCGCGCGATGGGTGAAGATCGTCACGAAGGTGCCGATCATCCCCG TCGTGATCGTGATCGGCATCGCCGGCCTCCTCGCCGTGCCCGCGTCGCAGCTGCAGCTCGGGCTGCCGAGCGGGGCGACC GAGCCCGCCGGATCCACCAGCCGCGTCGCGTACGACACCGTCTCCGACGCGTTCGGACCGGGCCACAACGGGCCGCTCGT CGTGCTCGTCGACATCACGCAGACCACCGACCCGATCGGGGTGCTCGGGGAGATCGGCGACGAGATCCGCGGGCTCGACG ACGTGGCCTTCGTCGGCACCGGCACGCCGAACCCGTCGGTCGACACCGCGATCATCCAGGTGCTGCCGGACAGCCCGCCC GAGTCCGCGGAGACGACCGCGCTCATGCAGTCGATCCGCGACCTCGCGCCCGGCCTCCACGACCGCTACGACACCCGTGT CTCCGTCACGGGCACGACCGCGGTGCAGAACGACATCTCGCAGCGGCTCGACCAGGCGCTCGTGCCGTTCGGCATCGTGG TGGTGGGGCTGTCGATCATCCTGCTGATGATCGTGTTCCGCTCGATCTTCGTGCCGATCAAGGCGGCCGTCGGCTTCCTG CTGAGCGTCGTCGTGTCGTTCGGCACCGTGGTCCTGATCTTCCAGGACGGCGCGTTCGCGGACGTCCTCGGGGTGACGCC GGGCCCGATCCTGAGCTTCATGCCGATCCTGCTCATGGCGATCCTGTTCGGGCTCGCCATGGACTACGAGGTGTTCCTCG TCTCCGGGATGCGTGAGGACTTCGTGCACCACGGCGATGCGAAGCGCGCCATCGTCACCGGCTTCTCGGGCGCGGCCCGC GTCGTGACGGCGGCCGCCCTCATCATGTTCTTCGTCTTCGCGGCCTTCGTGCCCGAGGGCGCGGGCGTGATCAAGACCAT CGCGCTCGGGCTCGCGGTCGGCATCTTCTTCGACGCCTTCCTCGTGCGCATGACCCTGGTGCCCGCGGCCATGGCGCTGC TCGGGAAGCGGGCGTGGTGGATCCCGCGCTGGCTCGACCGGATCCTGCCCGACGTCGACATCGAGGGCGAGGGCCTCCGC GAGCGCCAGGACGACGTGGACTGGGCCCGGGCGTCCGGCGCCGCCGTCGCGACCGAGCGGCTCGTCGTGGGGGTGCCGGG CCGACGGCTCGCGCCCGTCGACCTCAGCGCACCGGCCGGATCCCTCGTGCTCGTCGAGGGCGACGTCGCCGACCGGCGCC TCCTCGGGGCGACGCTCGGCGCCCGGCTCGCGCCGCTGTCCGGCCGCGCGCACGTCGCCGGGCACCCGCTCGCCTCGGAG GCCGGCCGCGTGCTCACGAGCGTGGCGATGGCCGACCTCGGCCGCGTCGACCGGGTGGACTCGGGGGTGACCGTGGGCGA CCTGCTCACGGAGCGCATCGACCTGTCGGAGCCGATGGGCCGCCGCCGCGGCGCCCGCGCGCGCCAGGCGGAATGGCTCG GCCGGATCGACCAGGCGGCCGACGCCGCGGGGGCCCGCCGCATCGGCGCCGACGACCCCGTCGGATCCCTCCTGCCGCTC GAGCGCGCCATCGCCCTGACCGCCGTCGCCGCCTCGGGGCGCGCCCCGGTGCTCGTGCTCGACGTGGTGGATCCCTTCCC GGACGCCGCCGCCGAGCGCGCGTTCCTCGCCGCCCTGCCCGCCCTCGTGCACGAGAGCACGACCGTCCTGCTGGGCGCGC CGTGGTTCCCGGACGAGCACGGGATCCCGGGCAGGCCCACCGTGCGCCTCCGCCTCCACGCGGAGGATGCGCCCGCTCCC GACGCCGACGAGCGCCCCGACACCGACCAGCCCGTCACGACCGGCAAGGAGACCCGCCGATGA Protein sequence : MATLLYRLGRISFLHPWRVVAAWILVLGILLGGGLALGGKTQESFSIPGTESQEVIDRLAAVFPQAAGASAQIVTEAPAG AKVTDDADKAAIEATAKAAGEVDGVATALSPFSEYASDAVSDDGTVAITTVQFSGQSDQVTTATLDALKESAQAAEDAGL TVSFGGQVFQDIHYGVTVTEAFGVLFAGLVLVLTFGSMLAAGLPLIGALVGVAASAGALLAASKFVTVSSASPLLAVMIG LAVGIDYALFILMRHRTQLANGMPVERSASTAVATAGSAVIFAGVTVIIALLGLLVVQIPFLTVMGLGAAFAVLLAMGVA TTLLPAMLGLAGERLRPKEGSRAARRAKAQSEGTQRTLGARWVKIVTKVPIIPVVIVIGIAGLLAVPASQLQLGLPSGAT EPAGSTSRVAYDTVSDAFGPGHNGPLVVLVDITQTTDPIGVLGEIGDEIRGLDDVAFVGTGTPNPSVDTAIIQVLPDSPP ESAETTALMQSIRDLAPGLHDRYDTRVSVTGTTAVQNDISQRLDQALVPFGIVVVGLSIILLMIVFRSIFVPIKAAVGFL LSVVVSFGTVVLIFQDGAFADVLGVTPGPILSFMPILLMAILFGLAMDYEVFLVSGMREDFVHHGDAKRAIVTGFSGAAR VVTAAALIMFFVFAAFVPEGAGVIKTIALGLAVGIFFDAFLVRMTLVPAAMALLGKRAWWIPRWLDRILPDVDIEGEGLR ERQDDVDWARASGAAVATERLVVGVPGRRLAPVDLSAPAGSLVLVEGDVADRRLLGATLGARLAPLSGRAHVAGHPLASE AGRVLTSVAMADLGRVDRVDSGVTVGDLLTERIDLSEPMGRRRGARARQAEWLGRIDQAADAAGARRIGADDPVGSLLPL ERAIALTAVAASGRAPVLVLDVVDPFPDAAAERAFLAALPALVHESTTVLLGAPWFPDEHGIPGRPTVRLRLHAEDAPAP DADERPDTDQPVTTGKETRR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CMM_0093 | YP_001220832.1 | RND family transporter | Not tested | chp/tomA region | Protein | 9e-74 | 41 |
