Gene Information

Name : CMS_1394 (CMS_1394)
Accession : YP_001710121.1
Strain : Clavibacter michiganensis ATCC33113
Genome accession: NC_010407
Putative virulence/resistance : Unknown
Product : insertion element ISCmi2 transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3415
EC number : -
Position : 1464211 - 1465173 bp
Length : 963 bp
Strand : +
Note : N/R

DNA sequence :
GTGACTCACGCTAATGCCCCGTTCGCTCCCGTGGGCAGGCTTCGGCTTGCCCGGTTGATCGTTGAGGACGGGTGGCCGGT
CCGGCGTGCGGCGGAGAGGTTCCAGTGCTCGCCCGCGACCGCGTCGAGATGGGCTCGCCGGTATCGGGCCGGGTTGCCGA
TGACGGACCGCTCATCCCGCCCGCACCGGCAACCGACCCGCACGAGTCAGCGTCGGGAGCGGCGGATCATCGCGCTGAGA
TTCACTCGCCGGTGGGGCCCGCACCGCATCAGCTATCACCTCCGCGTTCCGCGTTCGACGGTCGAGCGGGTGCTGAACCG
GTATCGGATGCCGTTGCTCGAGCACGTCGATCTGAGCACCGGGCTCCCTGCCCGGCGGTCTCCTGCCCGACGCTACGAGC
ACTCCTCGCCGGGAGATCTGGTCCACGTCGACATCAAGAAGCTCGGCCGCATCCCGGACGGCGGCGGGCACCGAGTCCTC
GGCAGAGCGGCCGGCCGGAGGAACACTCCCCGGACCGGGCGGGGATACGCGTTCCTGCATCACGCCGTGGATGACCACTC
CCGACTGGCGTACTCCGAGATCCTCACCGACGAGCGCAAGGAGACCGCTGCCGCGTTCTGGGCCCGCGCGAACGCGTTCT
TCACCGCCGCGGGCATCACCGTGATCCGTGTCCTGACGGACAACGGCTCCTGCTACCGCTCCCACGCCTTCACCGAGGCG
CTCGGCACCATCGCCCACACACGCACCCGCCCGTACCGGCCCCAGACGAACGGGAAGGTCGAGCGCTTCAACCGCACCCT
CGCCACGGAATGGGCTTACGCCCATCCCTATCGCACCGACGAGGCCCGCGCCGCGACCTACCCTGCCTGGCTGCATCACT
ACAACCACCACCGCCCCCACACCGGCATCGGCGGACTCACGCCCGCCGAACGCGTTCACAACCTCACTGGGAACTACACC
TAG

Protein sequence :
MTHANAPFAPVGRLRLARLIVEDGWPVRRAAERFQCSPATASRWARRYRAGLPMTDRSSRPHRQPTRTSQRRERRIIALR
FTRRWGPHRISYHLRVPRSTVERVLNRYRMPLLEHVDLSTGLPARRSPARRYEHSSPGDLVHVDIKKLGRIPDGGGHRVL
GRAAGRRNTPRTGRGYAFLHHAVDDHSRLAYSEILTDERKETAAAFWARANAFFTAAGITVIRVLTDNGSCYRSHAFTEA
LGTIAHTRTRPYRPQTNGKVERFNRTLATEWAYAHPYRTDEARAATYPAWLHHYNHHRPHTGIGGLTPAERVHNLTGNYT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnp7109-27 YP_001800924.1 transposase for insertion sequence Not tested Not named Protein 1e-49 52
CDBH8_0912 YP_005160004.1 transposase-like protein Not tested Not named Protein 2e-53 51