Gene Information

Name : rph (ABSDF0051)
Accession : YP_001705807.1
Strain : Acinetobacter baumannii SDF
Genome accession: NC_010400
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 51923 - 52639 bp
Length : 717 bp
Strand : +
Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs

DNA sequence :
ATGCGTATTGACCAACGTGCATTAGACCAATTACGTGAAGTGAAAATTACACGAAACTACACCCGTTATGCTGAAGGTTC
TGTGCTGGTCGAATTTGGTCACACCAAAGTCCTTTGTACTGCGAGCATTGATAACTCAGTGCCACGCTTTCTAAAAGGCC
AAGGTCAAGGCTGGGTAACAGCAGAATATGGCATGTTACCGCGCTCAACACACTCACGTTGTGACCGTGAAGCTGCTCGT
GGTAAACAAACTGGTCGTACTCAAGAAATCCAACGCCTGATTGGTCGTAGCTTACGTGCGATGGTTGATTTGAAAAAGCT
TGGTGAAAATACCATTACCATCGACTGTGATGTCATTCAGGCAGATGGCGGTACACGTACTGCTTCAATCACTGGTGCTG
CTGTAGCATTGGTTGATGCGATGAATGTTTTACTTGCACAGAAAAAAATTAAGCAAGATCCGCTTAAAGGCTTAGTTGCT
GCAATTTCTGTAGGTATGTATCAAGATGAAGTATTACTTGATCTTTGCTATGAAGAAGACTCGAACTGTCAAACTGACTT
AAATGTCGTGATGACACAAGCAGGCGAGTTTATTGAAATTCAAGGTACAGCGGAAGACAAACCGTTTACCCGTGCTCAAA
GCAATGCCATGTTAGAAATGGCTGAAAAAGGAATTGCCGAGCTTATTAAAAAGCAACAAGAAGCTTTAGGCTGGTAA

Protein sequence :
MRIDQRALDQLREVKITRNYTRYAEGSVLVEFGHTKVLCTASIDNSVPRFLKGQGQGWVTAEYGMLPRSTHSRCDREAAR
GKQTGRTQEIQRLIGRSLRAMVDLKKLGENTITIDCDVIQADGGTRTASITGAAVALVDAMNVLLAQKKIKQDPLKGLVA
AISVGMYQDEVLLDLCYEEDSNCQTDLNVVMTQAGEFIEIQGTAEDKPFTRAQSNAMLEMAEKGIAELIKKQQEALGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 1e-63 59