Gene Information

Name : ribD (ABSDF3314)
Accession : YP_001708385.1
Strain : Acinetobacter baumannii SDF
Genome accession: NC_010400
Putative virulence/resistance : Unknown
Product : bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : 1.1.1.193
Position : 3062469 - 3063554 bp
Length : 1086 bp
Strand : -
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme

DNA sequence :
ATGTCTGAGTTAAAACAAGATCAATACTGGATGCAGCAAGCCATTGAACTTGCCAAACGAGGACTCTATTCGACCAAGCC
TAATCCAAATGTTGGTTGTGTCATCGTCAAAGATAATCAGGTGATTGGTGAAGGTTTTCACCCTAGAGCTGGTCAGCCCC
ATGCGGAAGTTTTTGCATTACGTCAGGCAGGCGAACAGGCACAAGGCGCAACTGCTTATGTGACGCTTGAGCCGTGTGCT
CATTATGGACGAACCCCTCCGTGTGCTGAGGCGCTGGTTAAGGCGCAAGTTAAAAAAGTGGTAGTGGCATGTCCTGATCC
AAACCCGCTTGTTGCAGGTAAAGGTGTTCAGATATTAAAAAATGCCGGTATTGAAGTAGAAATCGGTATTTGTGAAGATT
TGGCAGCTCAACTTAATCAAGGCTTTTTAAAAGCGATGTCTAGCGGCATGCCATATGTACGATTAAAAGTTGCTTCTAGT
CTTGATGGACGTACTGCGATGGCATCTGGTGAGTCGAAGTGGATTACAGGTTCTGCGGCCCGTCAAGATGTACAACATTG
GCGTGCGATTTCAGGCGCCGTGATTACAGGTATTGAAACTGTAATTGCCGATGACTGCCAACTTAATGTACGTCCACTTC
ATAATGTTGATATCGAAACAGTTGCTCAGCCAAAACGTGTAATTCTAGATCGGAGAGGGCGTTTACCGCTCACCGCTAAA
ATTTTAGAAAATCCTGAAACTGTGATGGTCATGGGACCATATCGTCAGGAACTTGCTGACTTAGGCGTGATACAATTAGA
AATTCAGCCTTTAAAAACACTATTACAGACCTTATCTAAGCAGTACCAAATTTATGATGTGCTGATCGAGGCTGGCGCGA
CATTATCAAGTGCCTTTTTGCAAGAAGGCTTGATTGATGAAATGATCAGTTATGTGGCTCCAACTTTATTGGGGCAAAGT
GCAAGAGCCATGTTCAATGCAGATTTTGAATATATGGCACAGCAACTTCGTTTTAAACTTCTTGATGTAACACAACTTGA
TCAAGATATACGCTTAAGGTTAATCCCTACGCAAGAGAAAGTATGA

Protein sequence :
MSELKQDQYWMQQAIELAKRGLYSTKPNPNVGCVIVKDNQVIGEGFHPRAGQPHAEVFALRQAGEQAQGATAYVTLEPCA
HYGRTPPCAEALVKAQVKKVVVACPDPNPLVAGKGVQILKNAGIEVEIGICEDLAAQLNQGFLKAMSSGMPYVRLKVASS
LDGRTAMASGESKWITGSAARQDVQHWRAISGAVITGIETVIADDCQLNVRPLHNVDIETVAQPKRVILDRRGRLPLTAK
ILENPETVMVMGPYRQELADLGVIQLEIQPLKTLLQTLSKQYQIYDVLIEAGATLSSAFLQEGLIDEMISYVAPTLLGQS
ARAMFNADFEYMAQQLRFKLLDVTQLDQDIRLRLIPTQEKV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 1e-161 99
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 1e-161 99