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Name : tolC (ABSDF3274) Accession : YP_001708355.1 Strain : Acinetobacter baumannii SDF Genome accession: NC_010400 Putative virulence/resistance : Resistance Product : channel-tunnel spanning the outer membrane and periplasm segregation of daughter chromosomes Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1538 EC number : - Position : 3025914 - 3027260 bp Length : 1347 bp Strand : - Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type m : membrane component DNA sequence : ATGAAAATAAAATTAATGCTTGTTGCGGGTTTATGGAGTTTTACATCGTCGAGTTTTGCTCTAGATTTAGTTGAAACTTA TGAGCGCGCAAAACTAAATGATCCGACGTGGCAAGCGAATCAACAACAGTTTGAAGCAGATCAGCTTAATTTAGGTTTAG CAACAGGCGCTTTACTACCAACAGTTACATTATCTGGAAATATTACCCGTAATCGACAAACGGTAAAGCGTTCAAATTTT CCCGGTGTTGATCAGGAAGGACTTTCCGATGCTTTGGTAAGTAATACATCGACTACCAAACAAGCAACTTTATCTGCCCG TCAGCCTCTTTTTCGTATGGATGCCTGGGAAGGTTATAAACAGGTTAAAACTTCGGTTGCTCTTAGTGAAATTACTTTAA AACTGCAAAAACAAGATCATGTTTTAAATGTAGCTGAAGCGTATTTTAATGTACTGCGACAGCAGGCACTTACCGCTGCA TATTTACAAGAAGAAAAAGCTTTGCTTGAACAGCTCAATATGATGAATGCCAAGCTTAAAGAAGGGTTGGTAGCACGTAG TGATGTGAGTGAAGCAAATGCCCAGTATCAAAATGCCAGAGCCAACCGTATTGCTACCAATGTGCAGCTTCTATTGGCTC AAGAGCAACTATCTGAATATATTGGTCCTTATCAAGATAAGCTTGCTGTATTGAGAAGTGATTTTATCTTTCAAAAACCT TATCCGGCACAGCTCGATGAGTGGTTAGGATTAACCCAACAACAAAATTTAAAGATTCAGCAAGCACGTTTACAAAAGCG ATATGCTGAAGATCAACGTCGTGTGGAAAAAGCTGCACTTTATCCACAGATAGATGCAGTGGCGAGTTATGGTTATACCA AACAAACACCAGAAACGCTGATTTCGACTGATGGGAAGTTTGATCAGGTAGGGGTGGAGATGAACTGGAACTTATTTAAT GGAGGCCGGACCCGAACTTCTATTAAAAAAGCCAGTGTGGAGTTAAATAAAGCGCAAGCCCAACTTGATGCGGCCATTCG CCGTGCCAATGTCGATGTGAAAAGTGCTTTTATGCAGGTAGATACCGACCGAGCAAAACTTGAAGCAAGAAAGGCGGCAA TGGACTCTTCAGCACTTGTTTCTCAAGCTTCAAAAGCAAGTTATAACGAAGGCTTAAAAAGTATGGTCGATGTTTTATTG GCGCAGCGTAATGCTTTTTCAGCAAAACAGGATTATCTTAATGCTCAGTATGATTATTTATTAAATGTATTACGTTTAAA AGCGGCTGTAGGTCAGCTAGGAGAAAAAGATTTAGTTGAATTAAACAGCTGGTTAACGTATCAGTAA Protein sequence : MKIKLMLVAGLWSFTSSSFALDLVETYERAKLNDPTWQANQQQFEADQLNLGLATGALLPTVTLSGNITRNRQTVKRSNF PGVDQEGLSDALVSNTSTTKQATLSARQPLFRMDAWEGYKQVKTSVALSEITLKLQKQDHVLNVAEAYFNVLRQQALTAA YLQEEKALLEQLNMMNAKLKEGLVARSDVSEANAQYQNARANRIATNVQLLLAQEQLSEYIGPYQDKLAVLRSDFIFQKP YPAQLDEWLGLTQQQNLKIQQARLQKRYAEDQRRVEKAALYPQIDAVASYGYTKQTPETLISTDGKFDQVGVEMNWNLFN GGRTRTSIKKASVELNKAQAQLDAAIRRANVDVKSAFMQVDTDRAKLEARKAAMDSSALVSQASKASYNEGLKSMVDVLL AQRNAFSAKQDYLNAQYDYLLNVLRLKAAVGQLGEKDLVELNSWLTYQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00321 | YP_008207786.1 | Outer membrane protein | Not tested | AbaR25 | Protein | 0.0 | 99 |
| BJAB0868_00325 | YP_008211651.1 | Outer membrane protein | Not tested | AbaR26 | Protein | 0.0 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| tolC | YP_001708355.1 | channel-tunnel spanning the outer membrane and periplasm segregation of daughter chromosomes | NC_010400.5987140.p0 | Protein | 0.0 | 100 |
| tolC | YP_001708355.1 | channel-tunnel spanning the outer membrane and periplasm segregation of daughter chromosomes | NC_010410.6003655.p0 | Protein | 0.0 | 99 |
| tolC | YP_001708355.1 | channel-tunnel spanning the outer membrane and periplasm segregation of daughter chromosomes | NC_011595.7058144.p0 | Protein | 0.0 | 99 |
