Gene Information

Name : hemC (ABSDF3262)
Accession : YP_001708345.1
Strain : Acinetobacter baumannii SDF
Genome accession: NC_010400
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : 2.5.1.61
Position : 3016642 - 3017586 bp
Length : 945 bp
Strand : +
Note : transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis

DNA sequence :
TTGTTTGACCGGCCCATGCTTGAATTTATGAAAACCTTGAAAATTGCTACACGACAAAGCCCACTTGCTCTTTGGCAGGC
AGAACATATTTGTGCCCGTTTACAGGAGCTTCACCCAGATTTAACGGTAGAGTTGGTCAAGTTTGTCACGCAGGGCGATA
AAATTTTAGATACACCTTTAGCAAAAATTGGTGGCAAAGGATTGTTCGTTAAAGAATTGGAAGCAGCACTTTTAGATGGT
CGTGCGGATCTTGCTGTACATTCAATGAAAGATGTTCCGATGGCATTACCAGAAGGTTTAACTTTGGCCGTAATTTGCGA
ACGTGAAGATCCGTTAGATGCTTTTGTTTCGAATCAATTTGAAAAATTTGCTGATTTGCCGCAAGGAGCAAAAGTTGGCA
CCTCAAGTTTACGTCGTAAATCACAAATTTTAAAACAACGTCCAGATCTACAAATTATTGATTTACGTGGTAATGTCGGT
ACCCGCTTAGCGAAGCTAGACGATGGTCAATATGATGCCATTATCTTGGCGAGTGCTGGTTTAAAACGTTTAGGATTGGC
AGAACGCATTCGTCACTGTATCGAGCCAAGTGTAAGTTTGCCTGCGGTGGGACAGGGCGCTCTTGGTTTGGAATGCCGCG
CAGATGACCAAGAAGTATTGGCTTTAATTCAGCCACTTCTACACCCAGAGACAGATATATGTGTACGTGCTGAGCGAGCA
TTCAATGCCTATCTTGAAGGTGGTTGTCAGGTGCCGATTGCAGGTTATGCAACACTCCAAGATGGTAAAATTCATATTGA
AGGCCGTGTAGGTAGTGTTGATGGGCAAACATTATTACGGGCTGAGCTTACAGATGAAGCGAATAATGCTCAGCAATTAG
GTGAAAACCTTGCTCGGAACTTACTTGATCAAGGCGCTGGTGATTTATTAAAGGCCCTCTACTAA

Protein sequence :
MFDRPMLEFMKTLKIATRQSPLALWQAEHICARLQELHPDLTVELVKFVTQGDKILDTPLAKIGGKGLFVKELEAALLDG
RADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLPQGAKVGTSSLRRKSQILKQRPDLQIIDLRGNVG
TRLAKLDDGQYDAIILASAGLKRLGLAERIRHCIEPSVSLPAVGQGALGLECRADDQEVLALIQPLLHPETDICVRAERA
FNAYLEGGCQVPIAGYATLQDGKIHIEGRVGSVDGQTLLRAELTDEANNAQQLGENLARNLLDQGAGDLLKALY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 1e-143 99
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 1e-143 99