Gene Information

Name : algR (ABSDF3261)
Accession : YP_001708344.1
Strain : Acinetobacter baumannii SDF
Genome accession: NC_010400
Putative virulence/resistance : Virulence
Product : alginate biosynthesis regulatory protein
Function : -
COG functional category : K : Transcription
COG ID : COG3279
EC number : -
Position : 3015828 - 3016568 bp
Length : 741 bp
Strand : +
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type r : regulator

DNA sequence : 
ATGAAGGTGCTAATTTGTGATGACGAACCACTTGCAGTGGAACGATTGTCACGTTTAGTTTCAAAGATGGGACATGAGGT
TGTTGCAACAGCTCATCATGGCCAAGATGCCTTGGAACAGGCACGGCTTCATCACCCAGATGTGATTTTACTTGATATCC
AGATGCCGGGTATGAATGGTCTCGTCTGTGCGGAGCAATTAAGCCAACTTAATCCTCGACCTGCCATAGTGTTTTGCACA
GCTTATGATCAGCATGCATTGGAGGCATTTAAGTCACAAGCACAAGCTTATCTTCTTAAGCCCATTGATCCTCAAGAGCT
GGAGCAGACATTTAAGCAATTAACCCAGCTAACGCAAGCACAGCTCAGCGCTTTGCCTAAACCTGAGCTTTTACAGGATT
TAAAAACACAACGTCATCAAATTGCTGCTAAAACCTATCGTGGGGTTGAGCTAATTCCTGTTGAAAATATCTATTACTTT
TTAGCAGATCAGAAATATGTCACGGTACGTCATAAAAATGGCAGCGTATTGATTGACGAAACACTTAAAGAACTTGAAAC
TGAGTTCGCAGATCAGTTCATCCGTATTCACCGTAATGCATTGGTCTCGATTGCTTATTTAGATGGTTTGGAGCTAGTAA
GTTCGGGCCAATATCAGGTTCGCTTACGTGGCTTAGATGAAAGACTTTCCGTAAGCCGCCGTCATTTATCTACCCTTAGA
GAACGGATACACCAACTTTAA

Protein sequence : 
MKVLICDDEPLAVERLSRLVSKMGHEVVATAHHGQDALEQARLHHPDVILLDIQMPGMNGLVCAEQLSQLNPRPAIVFCT
AYDQHALEAFKSQAQAYLLKPIDPQELEQTFKQLTQLTQAQLSALPKPELLQDLKTQRHQIAAKTYRGVELIPVENIYYF
LADQKYVTVRHKNGSVLIDETLKELETEFADQFIRIHRNALVSIAYLDGLELVSSGQYQVRLRGLDERLSVSRRHLSTLR
ERIHQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00330 YP_008211656.1 Response regulator of the LytR/AlgR family Not tested AbaR26 Protein 2e-102 100
BJAB07104_00326 YP_008207791.1 Response regulator of the LytR/AlgR family Not tested AbaR25 Protein 2e-102 100

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
algR YP_001708344.1 alginate biosynthesis regulatory protein VFG0119 Protein 2e-46 46