Gene Information

Name : rpmE2 (ABSDF3120)
Accession : YP_001708238.1
Strain : Acinetobacter baumannii SDF
Genome accession: NC_010400
Putative virulence/resistance : Unknown
Product : 50S ribosomal protein L31
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0254
EC number : -
Position : 2877760 - 2878014 bp
Length : 255 bp
Strand : +
Note : RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially g

DNA sequence :
ATGCGTAAAGATATTCATCCTGCTTACCAACAAGTGTTATTTCATGACACCAATGCAGACGTATACTTCTTAATTGGTAG
TACTATTCAGACTAAACAAACCAAAGAATATCAAGGACAAGTCTATCCTTATGTGACTCTTGATATTTCAAGTGCTTCAC
ATCCTTTCTATACAGGTGAAGTACGTCAAGCAAGTAATGAAGGGCGTGTTGCAAGCTTTAATAAACGCTTCGCCCGCTTC
AATCGTAAAAGTTAA

Protein sequence :
MRKDIHPAYQQVLFHDTNADVYFLIGSTIQTKQTKEYQGQVYPYVTLDISSASHPFYTGEVRQASNEGRVASFNKRFARF
NRKS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rpmE2 NP_287095.1 50S ribosomal protein L31 Not tested TAI Protein 4e-19 58
rpmE2 NP_286687.1 50S ribosomal protein L31 Not tested TAI Protein 4e-19 58