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Name : xcpR (ABSDF2893) Accession : YP_001708053.1 Strain : Acinetobacter baumannii SDF Genome accession: NC_010400 Putative virulence/resistance : Virulence Product : general secretion pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 2654991 - 2656484 bp Length : 1494 bp Strand : - Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type t : transporter DNA sequence : GTGATGCAAATATTGAAACAAATACAAGTTCCATATAGTTTTGCCAAGCGTCATGGTGTTTTATTTCGTTATGACGGTGA TCAAGTTTTTATTGTTAGACGTCAAAATACAGAAAAAATTGCATTGCAGGAAGCAAGACGAATTTTGGGGAAACCTGCAC ACTATCAATTATGCACTGAACAAGAATTTAATAGTCTATTAAGTACCAGTTATGCAGGGGATACAGGCGAATCTCAACAA GTAGCTGCGGGCTTAGAAGACCATCCGGATTTATTAAGCCTTGCAGATCAGGTGCCTGAAACAGAAGACTTAATGGATCA AGAAGATGACGCGCCTATTGTTCGTTTGATCAATGCGCTTCTCTCTGAGGCAATTCGTGTTGGTGCTTCAGATATCCATA TTGAAGCTTTTGAAAAAAAGCTATCAGTTCGTTTACGAGTAGATGGACAATTGCGTGAGATTGTACAACCGCGCCGTGAA CTAGCCCCGTTACTTGTTTCGCGTATTAAAGTTATGGCGAAACTCGATATTGCCGAAAAGCGTGTACCGCAAGATGGGCG TATTTCTTTACGTCTTGCTGGTCGTGAAGTCGATGTCCGTGTTTCAACTTTGCCTTCTTCTCATGGTGAAAGGGTGGTCA TGCGTTTACTCGATAAACAAGCGGGTCGCCTTAATATGACTCACCTAGGTTTAATGGCAAATGACTATGAACGTTTAACT CAGTTAGTACATCGTCCGCATGGTATTATTTTGGTCACAGGGCCTACTGGTTCGGGGAAAACGACGACTTTATATGCTGC CTTATCTGATCTAAATGACAATACTCGTAACATCTTAACTGCCGAAGATCCAATTGAGTATCAGCTTGAAGGTATTGGCC AAACTCAAGTGAATACCAAAGTGGATATGACTTTTGCTCGAGCTTTAAAGGCAATGTTACGTCAAGATCCAGATGTGGTC ATGGTGGGGGAGATTCGTGATCTGGAAACTGCTGAAATTGCGGTGCAGGCATCCTTAACAGGTCATTTGGTGTTATCAAC ACTACATACCAATACCGCTATTGGTGCAGTGACTCGACTTAAAGATATGGGGATTGAACCTTTCCTGCTTTCAAGTTCTT TAATTGGGGTGGTTGCGCAGCGTTTGGTTCGTACTTTATGTCCACATTGTATGACATGGCGTGAAGCCGATACTTTTGAG AAGCAGGTTTTTCAGCATATTTCCCATGAACCAAGTTTAAAGTTACCAGAGGCTCAAGGGTGTGATCAGTGTTCTCATTT AGGGTTTAATGGCCGTACAGCGATTTATGAAATTGTACCTATTGATGAACCTATGCGCCGTCTCATTCATGGTAATGCAG CTGAATTTGAATTAGAAAATCATGCTCGTCAGTATTCTGGTTCTATTCGCGATGATGGTTTACGTAAGGTGCTCTCAGGT AAAACTACACTTGAAGAAGTGCTTCGTGTAACCAATGAAGCAAGTGAAGCATAA Protein sequence : MMQILKQIQVPYSFAKRHGVLFRYDGDQVFIVRRQNTEKIALQEARRILGKPAHYQLCTEQEFNSLLSTSYAGDTGESQQ VAAGLEDHPDLLSLADQVPETEDLMDQEDDAPIVRLINALLSEAIRVGASDIHIEAFEKKLSVRLRVDGQLREIVQPRRE LAPLLVSRIKVMAKLDIAEKRVPQDGRISLRLAGREVDVRVSTLPSSHGERVVMRLLDKQAGRLNMTHLGLMANDYERLT QLVHRPHGIILVTGPTGSGKTTTLYAALSDLNDNTRNILTAEDPIEYQLEGIGQTQVNTKVDMTFARALKAMLRQDPDVV MVGEIRDLETAEIAVQASLTGHLVLSTLHTNTAIGAVTRLKDMGIEPFLLSSSLIGVVAQRLVRTLCPHCMTWREADTFE KQVFQHISHEPSLKLPEAQGCDQCSHLGFNGRTAIYEIVPIDEPMRRLIHGNAAEFELENHARQYSGSIRDDGLRKVLSG KTTLEEVLRVTNEASEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 9e-136 | 59 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 7e-136 | 59 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| xcpR | YP_001708053.1 | general secretion pathway protein E | VFG0182 | Protein | 5e-144 | 65 |
| xcpR | YP_001708053.1 | general secretion pathway protein E | VFG2048 | Protein | 2e-135 | 59 |
| xcpR | YP_001708053.1 | general secretion pathway protein E | VFG1876 | Protein | 2e-129 | 56 |
| xcpR | YP_001708053.1 | general secretion pathway protein E | VFG0233 | Protein | 1e-86 | 49 |
| xcpR | YP_001708053.1 | general secretion pathway protein E | VFG2426 | Protein | 2e-76 | 48 |
| xcpR | YP_001708053.1 | general secretion pathway protein E | VFG1880 | Protein | 2e-82 | 42 |
