Gene Information

Name : ABSDF2798 (ABSDF2798)
Accession : YP_001707980.1
Strain : Acinetobacter baumannii SDF
Genome accession: NC_010400
Putative virulence/resistance : Unknown
Product : phage-related capsid scaffolding protein (GPO-like)
Function : -
COG functional category : S : Function unknown
COG ID : COG2433
EC number : -
Position : 2566798 - 2567736 bp
Length : 939 bp
Strand : -
Note : Evidence 2b : Function of strongly homologous gene; Product type h : extrachromosomal origin

DNA sequence :
TTGCGACGACATAGTCACATTGCCCATTCTGCACCTATCGAAATTGCCCGAACTCCAATTTTCAAAGGTAAATGCAGCAT
GAGCAGCAAAGAGCAGAAACCAAAAAAAGTTAAATCAAAGTGGTTCCGTATTGCCACGGCAGGGGATACCACAGATGGTC
GTGAAATTCAGGAAAACTGGATTCAAGAAATTGTCGAAACTTATAACCCACAAACTTACGGTGCGCGTATTAACGTCGAA
CACATCCGTAGCGTTTTTCCTGATAGCAGCTTTGGTGCTTACGGGGATGTTGTAGCTGTTAAAGCTGAAAAGGTTGAGGT
TAACGGTGAAAAAAAACTAACCCTGTTTGCCCAGATTGAACCAAATGAAAATTTGATTGAACTCAATAAGCGTAAGCAAA
AAATTTATACGTCAATTGAAGTTAATCCAAATTTCGCTAACACGGGTAAAGCTTATCTCGTGGGGTTGGCAGTCACTGAT
AGCCCAGCATCATTGGGTACCGATATGTTGCAGTTCGCTGCAAATGCAGAAGTAAATCCTCTTGAAAGTAAAAAACAGCA
TAAAGACAACCTGTTTACAGCTGCAATTGAAGCTGATCTGGATTTTGAAGAAGTTGCAGAACCAAAAGTTTTCGGTGCTG
GCTTAGTCGAATCAGTGCGTAAGCTGTTCAAAAAACAAGAACAACAAGACCAAGCAACAACTGAATCTTTCAGTAATCAG
GAACAAGCAATTCTTGAAATTGCCCAACAAGCGGCCGATCAGGGGGCCGAAGTAACAGAGCTTCAAAATTCCTATAAAGA
GCTTCAGCAAAAGCATGAGCAGTTGGCCAACGATTTTTCAGAACTCAAAGAAAAGCTCGACGGCACTCCAGACCAACCAT
CCCGTCCAAAAGCCTCTCGTTCTTCATTCTCTGAATTAGATGAAGACGTCGATTGTTAA

Protein sequence :
MRRHSHIAHSAPIEIARTPIFKGKCSMSSKEQKPKKVKSKWFRIATAGDTTDGREIQENWIQEIVETYNPQTYGARINVE
HIRSVFPDSSFGAYGDVVAVKAEKVEVNGEKKLTLFAQIEPNENLIELNKRKQKIYTSIEVNPNFANTGKAYLVGLAVTD
SPASLGTDMLQFAANAEVNPLESKKQHKDNLFTAAIEADLDFEEVAEPKVFGAGLVESVRKLFKKQEQQDQATTESFSNQ
EQAILEIAQQAADQGAEVTELQNSYKELQQKHEQLANDFSELKEKLDGTPDQPSRPKASRSSFSELDEDVDC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13465.1 putative capsid scaffold Not tested PAGI-6 Protein 7e-54 48