Gene Information

Name : ABSDF2797 (ABSDF2797)
Accession : YP_001707979.1
Strain : Acinetobacter baumannii SDF
Genome accession: NC_010400
Putative virulence/resistance : Unknown
Product : phage-related capsid completion protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2565752 - 2566762 bp
Length : 1011 bp
Strand : -
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type h : extrachromosomal origin

DNA sequence :
ATGCGTCCAGTTACCCGTAAAAAATATAATGCAGTAATGTCGAAATTAGCCGAATTAAACGGTGTAGAGACAGTCGAGAA
AAAATTTACTGTAGAACCATCAGTTCAACAAAAGCTTATTGATCATATTCAAGCTTCATCAACTTTCTTACAACGTATCA
ATATCCATGTGGTTCCTGAACAATCAGGTGAAGCTATTGGCTTAGGTATCACTCGCCCAATTGCATCGCGTACCAATACT
AATGTGGGTGAGCGACAAGCATCAGATCCTACAGCTTTAGACAACCGTTTTTATTTCTGCCGTAAAACTGATTTTGATAC
CGCCATCAAATATCAAAAGCTAGATCAATGGGCGAAGTTCAAAGACTTTTATTCACGTCTTCGTGGTGTAATTGTTAAAC
GCCAAGCACTTGACCGTATCATGATCGGCTTTAACGGTGTTTCAATTGCTGCGGATACTGATATTGTTGCGAATCCACTT
TTGCAAGATGTAAACAAAGGTTGGTTACAGAAGCAACGTGAAGAAAATAAGAGTCGAGTATTAAAAGAAGGCGCAACTGC
AGGCAAGTTAACAATTGGTAAAGATGGCGATTATAAAAACCTTGATGCATTAGTCATGAATCTTGTTGATGAAATGATTG
ATGAAGTTCATCAAGAAAATCCTGATTTGGTTGTTATTTGCAGTCGTAAGCTTCAATCAGACAAATATTTCCCATTGGTC
AATAAAGATCAGGAAAACTCAGAAAAATTAGCTGCTGATATTATTATCAGTCAAAAAAGAATGGGTAATTTACCTGTTTA
TGCAGTTCCTTTTTTCCCTGAAAACTGCCTTCTTGTGACGACCTTTGACAACCTTTCTATTTATGTTCAGGAAGGTGGCC
TACGTCGTACAGTCATTGACAACCCTAAACGCGACCAAATTGAAAACTATGAATCTTCAAATGAAGATTATTACATTGAA
GATCTCGGTCTTGCGGCAATGGCTGAAAACATTGAAGTGCTTGCGGGGTAA

Protein sequence :
MRPVTRKKYNAVMSKLAELNGVETVEKKFTVEPSVQQKLIDHIQASSTFLQRINIHVVPEQSGEAIGLGITRPIASRTNT
NVGERQASDPTALDNRFYFCRKTDFDTAIKYQKLDQWAKFKDFYSRLRGVIVKRQALDRIMIGFNGVSIAADTDIVANPL
LQDVNKGWLQKQREENKSRVLKEGATAGKLTIGKDGDYKNLDALVMNLVDEMIDEVHQENPDLVVICSRKLQSDKYFPLV
NKDQENSEKLAADIIISQKRMGNLPVYAVPFFPENCLLVTTFDNLSIYVQEGGLRRTVIDNPKRDQIENYESSNEDYYIE
DLGLAAMAENIEVLAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13466.1 predicted major capsid protein Not tested PAGI-6 Protein 5e-81 57
STY4625 NP_458707.1 putative major capsid protein Not tested SPI-7 Protein 2e-82 57
t4319 NP_807914.1 major capsid protein Not tested SPI-7 Protein 2e-82 57