Gene Information

Name : ABSDF2240 (ABSDF2240)
Accession : YP_001707525.1
Strain : Acinetobacter baumannii SDF
Genome accession: NC_010400
Putative virulence/resistance : Virulence
Product : ClpA/B-type chaperone
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 2064926 - 2067616 bp
Length : 2691 bp
Strand : -
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pf : factor

DNA sequence :
TTGAGAGTAATGATGAGTAGTTTAAAAATTTTAATTACAAAACTTTCTACAGCTGCACGCACTGCTTTAGAAAAATCTGC
TAATGCTTGTGTTCTTCAGCAAAACTACGAAATTGAAATTGAACATTTATTTTTAGAGTTACTTAATCAGCCTTTAGAAA
ACGATTTAAAAATTTTATTAAAAAAATATAAAATCTCAGCCGATGCTTTAGCAGATGATTTAAAAGAAACAATTTCTCAA
TTACCAAAAGGTAATACACGTACTCCAATTTTTGCTAAATCAATTGTTCGTTTATTTGAACAAGCTTGGTTATTGGCTTC
AGCAGAACAAAATCCTGTCATTCGTAGTGGTCATTTACTGGTTGCATTATTAACTGCACCTGACCTCTATCAAATTGCAA
CGAGAGCTTCGAGTTTATTCGATCTTTTCCCGATAGACTCAATGAAACATAAGTTTCTCGAAATTTGTGAAAAAAGTGTA
GAACAACAAGAAGAATCAAAAACATCTTCACAAGCAGATGAATTAGAACAAGCTGTGACTCCAACTGCAAAAACTCAAAA
AACACCTGCTTTAGATCAATATACAATTAATTTAACTGAAAAAGCGAAGAACGGCGGAATTGACCCTGTTATTGGGCGTG
AATATGAAATTCGTTTGATGCTTGATATTTTAATGCGCAGACGCCAGAACAACCCAATTTTAACTGGTGAGCCAGGTGTA
GGTAAAACAGCTGTAGTTGAAGGGTTGGCTTTAAAAATTGCTCAAGGTTTAGTTCCTGAGGCATTAAAAAATGTACATTT
GCATGTTTTAGATATGGGGCTTTTGCAAGCTGGGGCAAGTGTTAAAGGTGAATTTGAAAACCGTTTAAAGCAAGTTATTC
AAGAAGTCCAATCATCGGCTCATCCTATTATTTTATTTATTGATGAAGCGCATACGCTTATTGGAGCAGGTGGCCAAGCG
GGGCAAAACGATGCTGCCAATCTTTTAAAACCTGCACTTGCTCGTGGCGAGTTACGTACTATTGCTGCAACAACATGGGC
AGAATATAAACAGTATTTTGAGAAAGATGCTGCATTGAGCCGCCGTTTTCAGGTGGTAAAGGTTGAAGAGCCGACCGAAG
AAGTTGCTGTGGATATGCTACGTGCAATGATTCCCGTAATGCAAAAGCACTTTAATTTACAAATTGATGATGAAGCAATT
GTAACGGCTGTACATGCCTCTCATCGCTATATTAGTGGTCGTCAACTCCCAGACAAAGCAGTAAGTGTTCTTGATACTGC
AGCAGCGCGTGTAGCTTTGACCCAAAATGCACAACCAGTCAAACTTGATCAATTAAAAGCACAAGAACATAACTTAAAGC
TTGAGCAACAAATTTTGGAAAATGAACACCTTCAGATTCCAATACATCATGAACGATTAGAAAATCTGAAAAACCAACTA
AAGTCATTACAAAGTGAGATCCAAGAGACTCAGGAACAATGGCAAAAAGAATTAGAGCTAGTTCGTAAAATTCAGGAATT
AGAAGCGCAGAGCCATTCTAATGAGTCTGAAGCCTACGATCAGATTAATTTAATACGCAAAGACCTTGCTGATATTCAGG
GACAACAGCCGTTAGTTTTTGAGCGAGTAAACTCTCAGATCATCAATGAAATTATTTCTGATTGGACAGGTATTCCTGTT
GGGAAAATGGTCAATGATGAAATTAAGCAGATTTTAACGCTTGAAGATAAATTAGGTGAGCGTGTAATGGGGCAAGATTA
TGCACTTACACAATTAGTTCAAGGGATTAAAACTTCAAAAGCTAAATTAGAAGATCCAAATAAACCTCAAGGGGTGTTCC
TTTTAGTTGGACCTAGTGGGGTTGGTAAAACCGAAACTGCTTTAGCCTTGGCTAATGAGTTATATGGCGGTGAACAGCAT
TTAATCACGATTAATATGTCTGAGTATCAAGAAGCACATACTGTCTCTTCGCTTAAAGGTGCTCCTCCAGGCTATGTTGG
CTATGGTCAGGGTGGGGTTTTAACTGAAGCTGTACGCCGTAATCCTTATAGTGTTGTGTTACTCGACGAAATTGAAAAAG
CACATAGCGATGTTCAGGAATTGTTCTATCAAGTATTTGATAAAGGTACTTTAGAGGATGGTGAAGGGCGCGTTATTGAT
TTTAAAAACACGACAATCTTATTAACTTCAAATACGGGCTCGAGTGCAATTATGCAGGCATGTTTAAATCAGCCTGTAGA
AGAATGGCCTACCGCAGAAGATTTAATCGAACATTTAAAGCCGATTTTATATAAACAGTTTAAGCCAGCCTTTTTAGGGC
GTATGAGAGTTGTGCCATATTTCCCATTGCATGATGATTTATTGGTTCGAATTATTAAACATAAATTGGGCAAAATTACT
GCTCGAATTGAAAAACAATATGGAACGAAAGTTCAATATTCAGATGACTTGGTCGAGTTGCTACTCAGCCGTTGTACTGA
AGTGGATAGTGGCGCCCGTAATGTTGATAACATCTTAAATTCTACAGTTTTACCTGCTTTGGCAACTGAAATTTTAGTGG
CGTTAGCAGATCAAAAATTGCCGAAATTGATCATGATTGATGCAAAAGATGACGAGATCCAATATTTACTAGATCCTGTG
GCGAAGCCTGCTAAAAAACGGACTAGTAAAAAGTTGAAATCAGAAGTTTAA

Protein sequence :
MRVMMSSLKILITKLSTAARTALEKSANACVLQQNYEIEIEHLFLELLNQPLENDLKILLKKYKISADALADDLKETISQ
LPKGNTRTPIFAKSIVRLFEQAWLLASAEQNPVIRSGHLLVALLTAPDLYQIATRASSLFDLFPIDSMKHKFLEICEKSV
EQQEESKTSSQADELEQAVTPTAKTQKTPALDQYTINLTEKAKNGGIDPVIGREYEIRLMLDILMRRRQNNPILTGEPGV
GKTAVVEGLALKIAQGLVPEALKNVHLHVLDMGLLQAGASVKGEFENRLKQVIQEVQSSAHPIILFIDEAHTLIGAGGQA
GQNDAANLLKPALARGELRTIAATTWAEYKQYFEKDAALSRRFQVVKVEEPTEEVAVDMLRAMIPVMQKHFNLQIDDEAI
VTAVHASHRYISGRQLPDKAVSVLDTAAARVALTQNAQPVKLDQLKAQEHNLKLEQQILENEHLQIPIHHERLENLKNQL
KSLQSEIQETQEQWQKELELVRKIQELEAQSHSNESEAYDQINLIRKDLADIQGQQPLVFERVNSQIINEIISDWTGIPV
GKMVNDEIKQILTLEDKLGERVMGQDYALTQLVQGIKTSKAKLEDPNKPQGVFLLVGPSGVGKTETALALANELYGGEQH
LITINMSEYQEAHTVSSLKGAPPGYVGYGQGGVLTEAVRRNPYSVVLLDEIEKAHSDVQELFYQVFDKGTLEDGEGRVID
FKNTTILLTSNTGSSAIMQACLNQPVEEWPTAEDLIEHLKPILYKQFKPAFLGRMRVVPYFPLHDDLLVRIIKHKLGKIT
ARIEKQYGTKVQYSDDLVELLLSRCTEVDSGARNVDNILNSTVLPALATEILVALADQKLPKLIMIDAKDDEIQYLLDPV
AKPAKKRTSKKLKSEV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 5e-165 49
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 5e-130 43
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 4e-130 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ABSDF2240 YP_001707525.1 ClpA/B-type chaperone VFG2076 Protein 7e-168 48
ABSDF2240 YP_001707525.1 ClpA/B-type chaperone VFG2084 Protein 4e-146 46