|
Name : dnaB (ABSDF1567) Accession : YP_001706971.1 Strain : Acinetobacter baumannii SDF Genome accession: NC_010400 Putative virulence/resistance : Unknown Product : replicative DNA helicase;chromosome replication, chain elongation Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : - Position : 1469017 - 1470462 bp Length : 1446 bp Strand : - Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme DNA sequence : ATGTCTCAGGCGAATGCCACTTCTTTAACCCTTTCATCTCCAACAGAAAATAAGACGAGTGAATCAGGCCAACTTAAAGA GTTTCGCACTCCCCCACACAATTTAGCCATTGAGCAAGCTGTACTTGCTGCGCTGATGACCGTTGCTGAATCTTTTGAAC AAGTCAGTGACTTACTCAAAGAAAATGATTTTTATGCCACTCGTCATAAATATATTTACCGTGCAATTGAAAAATTAGCA CAGGAAAACTCACCGTATGATGCGGTTTTGGTCAACGACTGGCTTTTAAAACAAAACTTACTCGACGCAATTGGCGGTGA AGAATATTTGATGCAGCTTATGGCTGACTCACCTTCGAGTTTCTATAATCTTGAAACTTATGCGACTAAAATTAAAGAAT TTTCTACACTACGCAGTATGATTAAGGTAAGTACTGAAATTTTACAAAATGCTTATGACACAAAAGGTCGAGGTGTAAGT GAAATTTTAGATTTAGCCGAAACAAGTATTTTCTCTTTAGCAGAACAACATAACAACAATAAAAAAGATTCTGGTCCTAA AGCAATTAGTTCTGTAACTGCCGATGTAATTAGTAAACTTGATGAACTTTCAAAATTAGACGGAAATATTACTGGTTTAA CGACTGGCTTCTTAGAGCTCGATAATAAAACTTCTGGTATGCAACCGGGTGATTTGATTATTGTCGCAGCACGTCCGTCT ATGGGTAAAACTACTTTTGCCATGAATTTGGTTGAAAGTGTTTTGCAATACAATAAACTCCCAGCTCTCGTCTTCTCTAT GGAGATGCCAGCAGACTCTATTGCGATGCGTCTAATTTCAGCTATGGGTAAAGTGCATCAAGGGCATTTACGTTCAGGTA ATTTGGATGCTGATGAATGGACTAAAGTAACGGGTACCATTCTGCAACTTCAACAAATGCATTTGTATATTGATGATTCC TCTGCCCTACCACCTACTGAAGTTCGTGCCCGAGCTAGACGTATCGCAAAAATGCATGATGGTAAAATCGGCTGTATCAT GGTCGACTATTTACAGTTGATGAAAGTTCCGGGCATGGGTGACAACCGTGTTGGTGAGATCTCGGAAATTTCACGTAGCT TAAAAGCTTTAGCTAAAGAAATGAACTGTCCTGTGATTGCACTATCTCAGCTTAACCGAAGTCTGGAAAACCGACCTAAT AAACGCCCAGTAATGTCTGACTTACGTGAATCTGGTGCGATTGAGCAGGATGCCGACTTAATCATGTTTATTTACCGTGA TGAAGTCTATAACAAAGAATCGAAAGAAGCAGGCACCGCAGAAATTATCATCGGTAAACAGCGTAATGGTCCAATTGGTA CTGTTCGCCTTGCCTTTGAAGGCCAATATACTCGTTTTAGTAATCTCTCTCCTGAATATTACAACCAATATGATGATGAA GAATAA Protein sequence : MSQANATSLTLSSPTENKTSESGQLKEFRTPPHNLAIEQAVLAALMTVAESFEQVSDLLKENDFYATRHKYIYRAIEKLA QENSPYDAVLVNDWLLKQNLLDAIGGEEYLMQLMADSPSSFYNLETYATKIKEFSTLRSMIKVSTEILQNAYDTKGRGVS EILDLAETSIFSLAEQHNNNKKDSGPKAISSVTADVISKLDELSKLDGNITGLTTGFLELDNKTSGMQPGDLIIVAARPS MGKTTFAMNLVESVLQYNKLPALVFSMEMPADSIAMRLISAMGKVHQGHLRSGNLDADEWTKVTGTILQLQQMHLYIDDS SALPPTEVRARARRIAKMHDGKIGCIMVDYLQLMKVPGMGDNRVGEISEISRSLKALAKEMNCPVIALSQLNRSLENRPN KRPVMSDLRESGAIEQDADLIMFIYRDEVYNKESKEAGTAEIIIGKQRNGPIGTVRLAFEGQYTRFSNLSPEYYNQYDDE E |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 6e-77 | 46 |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 1e-87 | 45 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 4e-80 | 43 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 4e-80 | 43 |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 7e-78 | 43 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 9e-84 | 42 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 6e-84 | 42 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 4e-84 | 42 |
