Gene Information

Name : ABSDF1236 (ABSDF1236)
Accession : YP_001706712.1
Strain : Acinetobacter baumannii SDF
Genome accession: NC_010400
Putative virulence/resistance : Virulence
Product : two-component response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1145029 - 1145691 bp
Length : 663 bp
Strand : +
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pr : regulator

DNA sequence :
ATGAGAATTTTGCTTGCAGAAGATGATCGCTCTCAAGCTGAAAGTATTCAATCATGGTTAGAATTAGACGGTTATCAAGT
AGACTGGGTAGAACGTGGTGATTATGCCCTTACAGCAATTGAGCAGTATGATTATGACTGTATTTTGCTTGATCCGGGTT
TGCCCCAACTGGCTGGTGAAAAAGTTTTAACAACCATCCGCCACAAACAAAAAAACGTTCCCGTGATTTTTATTACCGCA
CGCGACAGTATTCATGACCGCGTAGAAGGGCTTGATTTAGGTGCAAATGATTATTTGGTTAAACCATTTAGCCTAGAAGA
ATTATCGGCTCGCATCCGCACTCAATTACGTAAACAAACTCTGAGTCAGCAATCGATTTTAACGTGGGGTGATTTGCAAC
TTGATACACAAGCGAAAGTTGTATTATCTGCTGGTAAGACTATCGATTTAACAGCAAAAGAATTTCAAATATTACGTAAA
CTTATGGTTCATCCTGAGCATATTATTACCCGTGATCAATTAGAAGAAGCACTTTATGCATGGGGAGAGGAAATTGAGAG
TAACGCAATCGAAGTTTTTATTTATCAGCTTCGAAAGAAAATCGGAAGCAGCAGTATTAAAACCATACGGGGGCTAGGCT
ACCGTATGGGAGACTTAAAATGA

Protein sequence :
MRILLAEDDRSQAESIQSWLELDGYQVDWVERGDYALTAIEQYDYDCILLDPGLPQLAGEKVLTTIRHKQKNVPVIFITA
RDSIHDRVEGLDLGANDYLVKPFSLEELSARIRTQLRKQTLSQQSILTWGDLQLDTQAKVVLSAGKTIDLTAKEFQILRK
LMVHPEHIITRDQLEEALYAWGEEIESNAIEVFIYQLRKKIGSSSIKTIRGLGYRMGDLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-26 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ABSDF1236 YP_001706712.1 two-component response regulator VFG0596 Protein 4e-27 41
ABSDF1236 YP_001706712.1 two-component response regulator VFG0473 Protein 3e-35 41