Gene Information

Name : CMS_pCS0064 (CMS_pCS0064)
Accession : YP_001705762.1
Strain :
Genome accession: NC_010399
Putative virulence/resistance : Virulence
Product : DNA recombinase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1961
EC number : -
Position : 47631 - 48263 bp
Length : 633 bp
Strand : -
Note : -

DNA sequence :
ATGACCTCATCCGTCCTCATCGGATACGCCCGCGTCTCGACCGACGCGCAGGACCTCACCGCGCAACGGGACGCCCTGCA
AACCCTCGGGGTTCCGACACGGCTCATCTACAGCGACAAGGGCATGACCGGCACGAACCGCGACCGCCCAGGTCTCCGCG
AGGCGTTAGCGGCGTGCCGAGAAGGTGACACGCTTGTAGTCACGAAGCTCGACCGCCTTGCCCGATCCCTCCGCGACGCG
ACCGACATCGCCGAAGAGCTCACCCAACGCGAAGTCCGGTTGAACCTCGGCGGTGCGGTCTACGACCCCATCGACCCGGT
CGGCCGGCTGCTGTTCAACGTGCTCGGCATGGTGGCCGAGTTCGAGTCCGACCTCATCCGCGCCCGGACCCGTGAGGGGA
TGGCTGTTGCGAAGGTGCGGGGGAAGCTGAAGGGGCGAAAGCCGAAGCTCTCCCCTGCCCAGGAACGGCACCTGGTCGCG
CTGCACCGCGCCGGTGATCACTCCGTCTCCGAGCTCGTGGAGCTGTTCGGGATCGGCCGGGCCACCGTGTACCGGGCCCT
GGACAGGCACCCGGTCACCACGAGCACCGAGGTCACCCTGCCCCGCGTCGACGACGATGAACCGACGTCGTGA

Protein sequence :
MTSSVLIGYARVSTDAQDLTAQRDALQTLGVPTRLIYSDKGMTGTNRDRPGLREALAACREGDTLVVTKLDRLARSLRDA
TDIAEELTQREVRLNLGGAVYDPIDPVGRLLFNVLGMVAEFESDLIRARTREGMAVAKVRGKLKGRKPKLSPAQERHLVA
LHRAGDHSVSELVELFGIGRATVYRALDRHPVTTSTEVTLPRVDDDEPTS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
1_318 CAJ77076.1 Resolvase Not tested AbaR1 Protein 5e-25 46
ABTW07_3871 YP_005797119.1 resolvase IS26 Not tested AbaR4e Protein 7e-25 46
tnpR ACN81015.1 TnpR resolvase Not tested AbaR5 Protein 7e-25 46
res AGK06966.1 resolvase Not tested SGI1 Protein 6e-29 45
res AGK07012.1 resolvase Not tested SGI1 Protein 6e-29 45
res AGK07070.1 resolvase Not tested SGI1 Protein 6e-29 45
res AAK02044.1 resolvase Not tested SGI1 Protein 6e-29 45
tnpR ACD85600.1 TnpR resolvase Not tested SGI2 Protein 6e-29 45
res AGF34985.1 resolvase Not tested SGI1 Protein 6e-29 45
res AGF35025.1 resolvase Not tested SGI1 Protein 6e-29 45
res AGF35059.1 resolvase Not tested SGI1 Protein 6e-29 45
res AGK06929.1 resolvase Not tested SGI1 Protein 6e-29 45
CDBH8_0918 YP_005160010.1 transposase-like protein Not tested Not named Protein 2e-20 42
tnpR ACF06154.1 resolvase Not tested Tn5036-like Protein 1e-21 42
tnpR YP_006098373.1 transposon Tn21 resolvase Not tested Tn2411 Protein 2e-19 41
tnpR AAL08439.1 resolvase TnpR Not tested SRL Protein 1e-19 41
tnpR AFV53121.1 Tn21 resolvase Not tested AbGRI2-1 Protein 1e-19 41
tnpR ACY75537.1 TnpR Not tested Tn6060 Protein 4e-23 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CMS_pCS0064 YP_001705762.1 DNA recombinase VFG1030 Protein 6e-20 41