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Name : MAB_0546 (MAB_0546) Accession : YP_001701299.1 Strain : Mycobacterium abscessus ATCC 19977 Genome accession: NC_010397 Putative virulence/resistance : Virulence Product : Probable ATP-dependent Clp protease ATP-binding subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 546836 - 549370 bp Length : 2535 bp Strand : + Note : Similar to CLPC_MYCBO 0.0 DNA sequence : ATGTTCGAGAGATTCACTGACCGCGCCAGGCGGGTGGTTGTGCTGGCCCAAGAAGAGGCCCGCATGCTCAACCACAACTA CATCGGCACCGAGCACATCCTGCTGGGTCTGATCCATGAGGGCGAGGGCGTCGCCGCCAAGTCGCTCGAGTCGTTGGGCA TCTCGCTGGAAGGGGTGCGCAGCCAGGTCGAGGAGATCATCGGCCAGGGTCAGCAGGCGCCGTCCGGGCACATTCCGTTC ACTCCGCGTGCCAAGAAGGTGCTGGAGCTGAGCCTGCGCGAGGCGCTGCAGCTCGGCCACAACTACATCGGCACCGAGCA CATCCTGCTCGGCCTGATTCGCGAGGGCGAGGGCGTTGCCGCACAGGTGCTCGTCAAGCTGGGCGCCGAGCTGACTCGGG TGCGTCAGCAGGTCATCCAGCTGCTCAGTGGCTACCAGGGCAAGGAGACCGCAGAATCGGGTACCGGTGGCAGGGGCGGA GAAGCCGGCACACCTTCTACGTCGCTGGTGCTCGACCAGTTCGGCCGCAATCTGACCGCGGCCGCCATGGAGGGCAAGCT CGATCCGGTCATCGGCCGTGAGAAGGAAATCGAGCGGGTCATGCAGGTGCTGAGCCGCCGCACCAAGAACAACCCGGTGC TGATCGGCGAGCCCGGTGTCGGCAAGACCGCCGTCGTCGAGGGTCTGGCCCAGGCGATCGTGCACGGCGAGGTGCCCGAG ACACTGAAGAACAAGCAGCTGTACACCTTGGACCTGGGGTCCCTGGTGGCCGGCAGCCGCTACCGCGGTGATTTCGAGGA ACGCCTCAAGAAGGTGCTCAAGGAGATCAACACCCGTGGTGACATCATCCTGTTCATCGACGAGCTGCACACGCTGGTGG GTGCGGGCGCGGCCGAGGGCGCGATCGACGCGGCCTCGATCCTGAAGCCGAAGCTGGCTCGTGGCGAGCTGCAGACCATC GGTGCGACCACACTCGACGAGTACCGCAAGTACATCGAGAAGGACGCCGCCCTGGAGCGCCGGTTCCAGCCGGTGCAGGT GGGCGAGCCGACGGTCGAGCACACCATCGAGATCCTCAAGGGTCTACGCGACCGCTACGAGGCACACCACCGGGTGTCCA TCACCGATGGCGCATTGGTTGCCGCGGCGACCCTGGCCGATCGGTACATCAACGACAGGTTCTTGCCCGACAAGGCGATC GACCTGATCGACGAGGCCGGTGCCCGCATGCGCATCCGCCGCATGACCGCGCCGCCAGACCTGCGCGAGTTCGACGAGAA GATCGCCGATGCGCGCCGGGAGAAGGAATCGGCCATCGACGCGCAGGACTTCGAGAAGGCCGCGCGCCTGCGCGACTCCG AGAAGCAGCTGGTGGCCCAGCGTGCCGATCGCGAAAAGCAATGGCGTTCAGGTGACTTAGATGTGGTCGCGGAAGTCGAT GATGAGCAGATCGCCGAGGTGCTGGGCAACTGGACCGGTATCCCCGTGTTCAAGCTGACCGAGGAAGAAACCACTCGGCT GCTGCGCATGGAGGACGAGCTGCACAAGCGGATCATCGGCCAGGAGGACGCCGTCAAGGCCGTCTCCAAGGCCATCCGCC GCACCCGTGCCGGTCTGAAGGACCCGCGGCGCCCCTCGGGCTCGTTCATCTTCGCCGGGCCGTCCGGTGTCGGTAAGACC GAGCTGTCCAAGGCGCTGGCCAACTTCCTGTTCGGCGACGACGACGCGCTCATCCAGATCGACATGGGCGAGTTCCACGA CCGCTTCACCGCCTCAAGGCTTTTCGGCGCTCCCCCGGGATACGTCGGCTACGAGGAGGGCGGCCAGCTCACCGAGAAGG TGCGCCGGAAGCCGTTCAGCGTGGTGTTGTTCGACGAGATCGAGAAGGCTCACCAGGAGATCTACAACACCCTGTTGCAG GTTCTCGAGGACGGTCGCCTCACCGACGGCCAGGGACGCACGGTCGATTTCAAGAACACCGTGCTGATCTTCACCTCGAA CCTGGGCACGTCGGATATCTCGAAGGCCGTCGGCCTCGGATTCTCCGAAGGTGCGGCCGGCTCGAACTACGAGCGGATGA AGCAGAAGGTCCACGACGAGCTCAAGAAGCACTTCCGTCCTGAGTTCCTCAACCGCATCGATGACATCATCGTCTTCGAG CAGCTGACGCAGGAACAGATCATCGAGATGGTCGACCTGATGATCGGGCGGGTGGGCAAGCAGCTCAAGACCAAAGACAT GGCCATGGAGCTCACCGACAAGGCCAAGTCGCTGCTGGCCAAGCGCGGATTCGATCCGGTGCTAGGCGCCCGCCCGCTGC GTCGGACCATTCAGCGCGAGATCGAGGACGCACTCTCGGAGAAGATTCTCTTCAACGAGGTCGGTCCCGGCGAGCTGGTC ACCGTCGACGTCGAGAACTGGGACGGCGAGAGTGCCGGCGAGGACGCGAAGTTCACCTTCGTCGGCCGTCCGAAGCCCGC ACTGGTCGCCGGTGAGGAGCCTGCCGCCGACCTGGCCGCCTCCGCCTCGGAGTAA Protein sequence : MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQQAPSGHIPF TPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVIQLLSGYQGKETAESGTGGRGG EAGTPSTSLVLDQFGRNLTAAAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE TLKNKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTI GATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDGALVAAATLADRYINDRFLPDKAI DLIDEAGARMRIRRMTAPPDLREFDEKIADARREKESAIDAQDFEKAARLRDSEKQLVAQRADREKQWRSGDLDVVAEVD DEQIAEVLGNWTGIPVFKLTEEETTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLKDPRRPSGSFIFAGPSGVGKT ELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNTLLQ VLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKAVGLGFSEGAAGSNYERMKQKVHDELKKHFRPEFLNRIDDIIVFE QLTQEQIIEMVDLMIGRVGKQLKTKDMAMELTDKAKSLLAKRGFDPVLGARPLRRTIQREIEDALSEKILFNEVGPGELV TVDVENWDGESAGEDAKFTFVGRPKPALVAGEEPAADLAASASE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 83 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| MAB_0546 | YP_001701299.1 | Probable ATP-dependent Clp protease ATP-binding subunit | VFG0079 | Protein | 0.0 | 60 |
| MAB_0546 | YP_001701299.1 | Probable ATP-dependent Clp protease ATP-binding subunit | VFG0080 | Protein | 6e-147 | 50 |
