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Name : MAB_0544 (MAB_0544) Accession : YP_001701297.1 Strain : Mycobacterium abscessus ATCC 19977 Genome accession: NC_010397 Putative virulence/resistance : Unknown Product : lysyl-trna synthetase (LysS) Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 544546 - 546048 bp Length : 1503 bp Strand : + Note : Similar to Q278T7_MYCFV 0.0 DNA sequence : GTGACTGATCCTGACGCGCAGACCAGCTTGCCGGAACAATTTCGCATCCGGCAGGCCAAGCGCGAGAAGCTGCTTGCCGA AGGCGTTCAACCGTATCCGGTGGAGGTGCCCAGAACCCATAGCCTCAAGCAGATTCGAGATGCCTACACGGATCTGGAAA CCGATACCAGCACCGGCGACCAGGTAGGTGTCTCGGGCCGGGTCATCTTCTCCCGCAACACCGGCAAGCTGTGTTTCGCG ACGCTTCAGGAGGGTGACGGCACCTCTCTACAGGTGATGATCAGCCTCGCCGGCGTCGGCGAGCAGTCGCTCGCCGACTG GAAGACCGATGTGGACCTAGGCGACATCGTCTTTGTGCACGGAGAGGTCATCAGCTCGCGCCGGGGCGAGTTGAGCGTGA TGGCGGATCGCTGGCAGATGGCATCGAAGTCCCTCCGGCCTCTGCCCGTTGCTCACAAGGAGATGTCCGAAGAGACCAGA GTGCGCCAGCGCTACGTGGATCTCATCGTGCGACCCGAGGCGCGCCAGATCGCGCGACAGCGTGTCGCGGTGATGCGGGC TATTCGTGACGCTATGCACCGCCGTGACTTCTTGGAGTTGGAGACGCCGATCTTGCAGACCCTCGCCGGAGGTGCTGCCG CACGCCCCTTCATTACGCATTCGAACGCGCTTGATATCGACCTGTATCTGCGTATTGCGCCGGAACTTTTCCTGAAAAAG GCACTCGTCGGGGGTTTCGACAAGATTTTCGAACTCAACCGGGTATTCCGAAATGAAGGCGCGGATTCCACACATTCCCC CGAATTCGTGATGTTGGAAACATACGAGACCTACGGCACATACGACACCGCCGCGACAATGATCCGTGAGCTCATCCAAG AGGTAGCCGACGACGCAATGGGAACCAGGCAGGTGACGTTGCCCGATGGGTCGACCTACGACTTGGACGGCGAGTGGACG ACCTTGGAAATGTATCCGTCGTTGTCAGAAGCTCTCGGGGAGGAGATCACGCCCGATACGCCGGTTGCCGAGCTATGGAA GATCGCAGATCGGGTTGGCGCCGAGATTCCTACCGACCGCGGTTATGGGCACGGAAAACTGATCGAGGAACTATGGGAAC ACCAGGTCGGTGACAAAATGTACGCTCCGACTTTTGTCAGGGATTTCCCAGTTGAGACGTCCCCGTTGACCCGTCAGCAC CGGAGTATTGCGGGTGTCACCGAGAAGTGGGATTTGTATGTCCGTGGCTTTGAATTGGCCACCGGGTACTCGGAGCTCAT TGACCCGGTCATTCAACGCGAAAGGTTCGTTGACCAGGCCCGATTGGCGGCCGCCGGTGATGATGAGGCGATGAGTCTGG ACGAGGATTTCCTCGGCGCGATGGAGCACGCGATGCCTCCTGCCGCAGGAACGGGGATGGGCATTGACCGGTTGTTGATG GCGCTTACGGGGCTGGGAATTCGAGAAACGATCTTGTTCCCGATTGTGCGACCCACACTCTGA Protein sequence : MTDPDAQTSLPEQFRIRQAKREKLLAEGVQPYPVEVPRTHSLKQIRDAYTDLETDTSTGDQVGVSGRVIFSRNTGKLCFA TLQEGDGTSLQVMISLAGVGEQSLADWKTDVDLGDIVFVHGEVISSRRGELSVMADRWQMASKSLRPLPVAHKEMSEETR VRQRYVDLIVRPEARQIARQRVAVMRAIRDAMHRRDFLELETPILQTLAGGAAARPFITHSNALDIDLYLRIAPELFLKK ALVGGFDKIFELNRVFRNEGADSTHSPEFVMLETYETYGTYDTAATMIRELIQEVADDAMGTRQVTLPDGSTYDLDGEWT TLEMYPSLSEALGEEITPDTPVAELWKIADRVGAEIPTDRGYGHGKLIEELWEHQVGDKMYAPTFVRDFPVETSPLTRQH RSIAGVTEKWDLYVRGFELATGYSELIDPVIQRERFVDQARLAAAGDDEAMSLDEDFLGAMEHAMPPAAGTGMGIDRLLM ALTGLGIRETILFPIVRPTL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 2e-167 | 64 |
