|
Name : MAB_0429 (MAB_0429) Accession : YP_001701182.1 Strain : Mycobacterium abscessus ATCC 19977 Genome accession: NC_010397 Putative virulence/resistance : Unknown Product : Putative oligopeptide ABC transporter, ATP-binding protein Function : - COG functional category : R : General function prediction only COG ID : COG1123 EC number : - Position : 429479 - 431128 bp Length : 1650 bp Strand : + Note : Similar to Q6AFU2_LEIXX e-151 DNA sequence : GTGGAGGTGCCCACAAGTGATTCCGTGGTCGACATCACGGGCCTGACTGTCGATTTCGAGGTGGACAAGCAGTGGGTTCC GGCCGTCAAGGGTGTCTCGTTGTCGGTCGCCAAGGGTGAGGTGCTGGCGATCGTCGGTGAATCCGGGTCGGGGAAATCGA CTACCGCCATGGCCATCCCGGCCTTGTTGCCGCCCAGCGCGCGCGTTCGCGGCAGCGTGAAGCTCAACGGTGCCGAGCTG CTCGGAGCCACCAACGACGAGTTGCGCGCTGTGCGCGGCAAGGACGTCGCCGTCATCTTCCAGGAGCCGATGACGGCGCT GAATCCGGTGTACACCATCGGTTGGCAGATCGCCGAAGCCGTTTGTGCACATAAGAAGATGTCGCGCAGGCAGGCGCGCG ACCGGGCCGTTGAATTGCTTGATCTGGTCGACATGCCCGAGCCGGCTAAGCGGGTCAAGCATTACCCGCACCAGCTTTCC GGCGGGCAGCGGCAGCGTGCCATGATTGCGCAGGCCCTCGCGTTAGATCCCGGGCTGCTCATCGCCGATGAGCCGACCAC CGCTCTCGATGTGACCGTGCAGGCCGAAATACTGGATCTCATGCGTGATCTGCGCCATCGTATCGACGCCGGCATCATCC TGATCACCCACGACATGGGCGTGGTGGCCGATATGGCCGACCGGATCATGGTGATGAAGGACGGTGAGGTCGTTGAGCAG GGCGATGCCGAGGGTATTTTCCATCGGGCTCAGCAGCCGTACACCCGGCAGCTGCTGGCCTCGGTGCCGCACCTGGGCGC CACCTTGCATGGTCGCGACGAAAGCAACCCACCACCAACAGATCTGGCGCTGAGTGTGGAACACGCGGTCATCGAATATC CGGGAAAGAGTGGGAGCTTCCGGGCTGTCGATGATGTGTCGTTCACCATCGGTAGGGGTGAGGTGGTGGGCCTCGTTGGT GAGTCAGGGTCCGGAAAGTCCACTATCGGCCGGGCGGCGGTAGGTCTACTGAGGGTGGCATCCGGAACTATTTGTGTTGC TGGACAGGATATTTCGACTGCCAACCGCAAGCAGCTGCGAGATATTCGGAGCAAGGTGGGGGTGGTCTTCCAGGATCCCG GATCCTCGCTGAACCCGCGATGGCCGATCGGCCAGTCGATTGCCGAACCATTGACCCTGCACACCGATATGGATCGCACC CAACGAGAGGGCAGGGTCAAGACGCTGTTGGAGCAGGTGCAGTTGCCGGCCGCTATGCGAAACCGCTTCCCCCATCAGCT CTCGGGTGGGCAGCGCCAGCGTGTCGGCATCGCGCGGGCGCTGGCGCTGGAGCCAACGCTGTTGATCGCGGACGAGCCGA CCTCCGCGCTGGATGTATCGGTGCAGGCGACGGTACTCGACTTGTTTGCCGAGCTGCAGCGCGAGCACGGGTTCGCCTGC CTGTTCATCAGTCACGACTTGGCGGTAGTCGAGTTGGTGGCGAGCCGTATCGCAGTGCTCAACCGCGGCCGGCTTGCCGA ATTCGGCTCGGATACACAGGTATTGACCGCGCCCAAGGACGACTACACCAAGCGCCTGTTGGCGGCCGTGCCAGTGCCGG ATCCGGAGCAGCAGCGGATCCGGCGCGAGGAGCGCCAGGCACTGCGCTGA Protein sequence : MEVPTSDSVVDITGLTVDFEVDKQWVPAVKGVSLSVAKGEVLAIVGESGSGKSTTAMAIPALLPPSARVRGSVKLNGAEL LGATNDELRAVRGKDVAVIFQEPMTALNPVYTIGWQIAEAVCAHKKMSRRQARDRAVELLDLVDMPEPAKRVKHYPHQLS GGQRQRAMIAQALALDPGLLIADEPTTALDVTVQAEILDLMRDLRHRIDAGIILITHDMGVVADMADRIMVMKDGEVVEQ GDAEGIFHRAQQPYTRQLLASVPHLGATLHGRDESNPPPTDLALSVEHAVIEYPGKSGSFRAVDDVSFTIGRGEVVGLVG ESGSGKSTIGRAAVGLLRVASGTICVAGQDISTANRKQLRDIRSKVGVVFQDPGSSLNPRWPIGQSIAEPLTLHTDMDRT QREGRVKTLLEQVQLPAAMRNRFPHQLSGGQRQRVGIARALALEPTLLIADEPTSALDVSVQATVLDLFAELQREHGFAC LFISHDLAVVELVASRIAVLNRGRLAEFGSDTQVLTAPKDDYTKRLLAAVPVPDPEQQRIRREERQALR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 3e-78 | 43 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 3e-78 | 43 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 3e-78 | 43 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 3e-78 | 43 |
