|
Name : MAB_2983c (MAB_2983c) Accession : YP_001703715.1 Strain : Mycobacterium abscessus ATCC 19977 Genome accession: NC_010397 Putative virulence/resistance : Resistance Product : Probable chloramphenicol resistance protein Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2814 EC number : - Position : 3042961 - 3044139 bp Length : 1179 bp Strand : - Note : Similar to Q76K66_RHOER e-97 DNA sequence : GTGACACTGCCTATCTACGCGCTCACCTTGGCCATATTCGCCCAGGGCTGTTCGGAATTCATGTTCGCCGGGCTCATCAC CGAGGTGGGTGACGACTTTGGTGTCTCGCTGGCTGCGGCGGGAACGCTGACGTCAGCGTTTGCCGTTGGCATCATCGTCG GTGCTCCACTGATGGCTCTTATCAGTGGTCGTTGGCCCCGGCGCCGGGCGCTCGTGTTGTTCTTGTCGGTCTTTATCGCA GCGCACATCGTGGGCGCGACGGCCGCGAGCTTTCCGTTGCTGTTGATCGTTCGTGTGGTTTCGGCGGTCGCTAACGCCGG ATTCCTGGCAGTGGCGCTGACGACAGCGATGTCCATTACGGGTCCACGCGCGAAGGGGCGCACCACAGCGTTGCTGCTCA GTGGCATAACAATCGCCTGTGTCGCAGGAGTACCCGGCGGCGCGGCGCTCGGCTACTTCTGGGGATGGCGTGCGGCGCTG TGGGCGGTGGTGCTGGTATCGGTGCCGGCGCTCGCGGCGATCATGTACGCACTACCAGTCGGACGGCCGGTGACCGGCTT ACCGGACGGAATTGGTGAATTGCGGACGCTTCGGAACCGACGGCTGCAGATAACGCTGGCCGCGGGAGTTCTGTGCAACG CAGCAACCTTTTGTGCCTTTACCTATCTGGCTCCCGTCTCGGTGCAGGTCACCTCGTTGAGTCCGGCGTGGACTCCGGCG CTCCTGGCACTCTTTGGGTGTGGCTCGTTTGTCGGCGTCCACGCCACGGGCAGACTCGCCGACTCACACGCCAACCTGGT AGCCGGTGGGGGCGGAGTGTTGCTGCTGGCGGGCTGGATCGCGTTCGCGGGCACGGCGGCTCACGACTGGCTTTTCGTCA CGCTCGTGTTCGCACTGGGCGCGTTGTCGTTCGGCGTCGGCTCGACCCTGTTTTCGCAGGGGCTGTACGCCGCGAGTGAT GCGCCCATGCTGGGCAGCTCGCTCACCACCGCTGCCTTCAACGTCGGTACCGTCATCGGCCCGTCGCTGGGAGGGGCGTC GATACACACCCCGCTGGGCTACCGAGGACCGCTATGGGTCAGTGTGATGTTGGCGGCGCTGGCGCTCGTGGTCACGCTGT GCGGGCTGCAGGCACGACGCCGAACTAGGAGGGCTGTAACGTCAGCGAGATCGAGTTGA Protein sequence : MTLPIYALTLAIFAQGCSEFMFAGLITEVGDDFGVSLAAAGTLTSAFAVGIIVGAPLMALISGRWPRRRALVLFLSVFIA AHIVGATAASFPLLLIVRVVSAVANAGFLAVALTTAMSITGPRAKGRTTALLLSGITIACVAGVPGGAALGYFWGWRAAL WAVVLVSVPALAAIMYALPVGRPVTGLPDGIGELRTLRNRRLQITLAAGVLCNAATFCAFTYLAPVSVQVTSLSPAWTPA LLALFGCGSFVGVHATGRLADSHANLVAGGGGVLLLAGWIAFAGTAAHDWLFVTLVFALGALSFGVGSTLFSQGLYAASD APMLGSSLTTAAFNVGTVIGPSLGGASIHTPLGYRGPLWVSVMLAALALVVTLCGLQARRRTRRAVTSARSS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cmx | YP_005160007.1 | chloramphenicol exporter | Not tested | Not named | Protein | 7e-57 | 49 |
| cmx2 | YP_001800935.1 | chloramphenicol exporter | Not tested | Not named | Protein | 7e-57 | 49 |
