Gene Information

Name : MAB_2892c (MAB_2892c)
Accession : YP_001703625.1
Strain : Mycobacterium abscessus ATCC 19977
Genome accession: NC_010397
Putative virulence/resistance : Unknown
Product : Pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 2944051 - 2945073 bp
Length : 1023 bp
Strand : -
Note : Similar to Q276K4_MYCFV e-156

DNA sequence :
GTGCGCCAGTCCAAATCGGGTGAGGCGCGTCACCGCACCTCCCGCCACAAAATCGCTGGTGCGGCCGCATTAGACTGGTC
GCAGACCCCGAGATTCAGGAGCCCCCAGTTGACTAGCACGACCAATGGAACGTCCCCCGAGACCGGCACCGGTACCGCTC
GCGTCAAGCGCGGTATGGCCGAGATGCTCAAGGGCGGCGTGATCATGGACGTTGTTACGCCCGAGCAGGCAAAGATCGCC
GAAGACGCCGGCGCCGTGGCCGTGATGGCGCTGGAGCGGGTGCCCGCGGACATCCGCGCCCAGGGTGGCGTGTCGCGCAT
GAGCGACCCGGACATGATCGACGGCATCATCAGCGCGGTCAGCATCCCGGTTATGGCCAAGGCCCGCATCGGGCACTTCG
TCGAGGCACAGATCCTGCAGAGCCTCGGTGTCGACTACATCGATGAGTCGGAGGTGCTGACCCCTGCCGATTACACCAAC
CACATCGACAAGTGGAAGTTCACCGTGCCGTTCGTGTGTGGTGCCACCAACCTGGGCGAGGCGCTGCGCCGCATCACCGA
GGGCGCGGCCATGATTCGCTCCAAGGGCGAAGCCGGCACCGGCGATGTGTCCAACGCGACCACACACATGCGCAAGATCG
GCGGCGAGATTCGCCGGCTCACCTCGCTGGCTGAGGACGAGTTGTACGTTGCCGCAAAGGAACTGCAGGCACCATACGAG
CTCGTTGTCGAGGTTGCGCGCGCCGGCAAGCTGCCGGTCACGCTGTTCACGGCCGGCGGTATCGCTACTCCGGCCGATGC
GGCGATGATGATGCAGCTTGGCGCCGAAGGCGTGTTCGTGGGTTCGGGCATCTTCAAGTCCGGTAACCCGGAGCAGCGTG
CCGCGGCGATCGTCAAGGCCACCACCTTCTATGACGACCCGGATGTGCTGGCCAAGGTGTCGCGTGGCCTGGGCGAGGCG
ATGGTCGGTATCAATGTGGAGGACATCGCGCAGCCGCACAGGCTCGCCGAGCGCGGCTGGTAG

Protein sequence :
MRQSKSGEARHRTSRHKIAGAAALDWSQTPRFRSPQLTSTTNGTSPETGTGTARVKRGMAEMLKGGVIMDVVTPEQAKIA
EDAGAVAVMALERVPADIRAQGGVSRMSDPDMIDGIISAVSIPVMAKARIGHFVEAQILQSLGVDYIDESEVLTPADYTN
HIDKWKFTVPFVCGATNLGEALRRITEGAAMIRSKGEAGTGDVSNATTHMRKIGGEIRRLTSLAEDELYVAAKELQAPYE
LVVEVARAGKLPVTLFTAGGIATPADAAMMMQLGAEGVFVGSGIFKSGNPEQRAAAIVKATTFYDDPDVLAKVSRGLGEA
MVGINVEDIAQPHRLAERGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 4e-116 83
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 3e-116 83
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 5e-116 83