Gene Information

Name : MAB_1290c (MAB_1290c)
Accession : YP_001702032.1
Strain : Mycobacterium abscessus ATCC 19977
Genome accession: NC_010397
Putative virulence/resistance : Virulence
Product : Probable thiol peroxidase (Tpx)
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2077
EC number : -
Position : 1295175 - 1295669 bp
Length : 495 bp
Strand : -
Note : Similar to TPX_MYCTU 8e-71

DNA sequence : 
ATGGCACAGATCACGTTGCGCGGAAACCCCATCAACACGGTCGGCGAGCTTCCCGCTGTCGGCTCTCCTGCCCCGGCATT
TGAGCTGGTAGGCGCCGATCTCGGCCCCGTCACCAGCGATCAGTACCGGGATAAGCCGGTGATCCTCAACATCTTTCCTT
CGATCGACACCCCCGTCTGCCAGGCCAGCGTACGCACCTTCAACCAGCGTGCCGCCGAGGCCGGCGCACCGGTGCTGTGT
GTCTCCAAGGACCTGCCGTTTGCCCAGAAGCGTTTCTGCGGTGCCGAGGGCATCGAGAACGTGGGTACCGCCTCGGCGTT
CCGGAGCTCGTTCGGCGAGGACTTCGGCGTCACCATCGCCGACGGCCCGATGACCGGTCTGCTGGGCCGCGCCATCGTCG
TGATCGGCGCCGACGGCAACGTCGCCTACACCGAGCTGGTTCCGGAGATCGCCCAGGAACCCGACTACGACGCGGTGCTC
GGGGCACTGTCCTGA

Protein sequence : 
MAQITLRGNPINTVGELPAVGSPAPAFELVGADLGPVTSDQYRDKPVILNIFPSIDTPVCQASVRTFNQRAAEAGAPVLC
VSKDLPFAQKRFCGAEGIENVGTASAFRSSFGEDFGVTIADGPMTGLLGRAIVVIGADGNVAYTELVPEIAQEPDYDAVL
GALS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 3e-33 43
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 3e-33 43
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 2e-33 43
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 2e-33 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MAB_1290c YP_001702032.1 Probable thiol peroxidase (Tpx) VFG0087 Protein 8e-34 43