Gene Information

Name : ytrE (Bsph_4375)
Accession : YP_001699960.1
Strain : Lysinibacillus sphaericus C3-41
Genome accession: NC_010382
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 4256458 - 4257144 bp
Length : 687 bp
Strand : -
Note : -

DNA sequence : 
ATGATTCAAGTTGAAAACTTACAACATACATTTTTAATCGGAAAAAAAGGGAAGGAAAAAAAGGTTCCTGTTTTAAAAGG
TGTGAACTTTGAGGTCAATAAAGGAGAAATCGTTGCCATTGTCGGAAAAAGTGGCTCTGGAAAGTCAACTTTATTACAAG
TTTTAGCTGGATTTATGAAGGTTGAGCATGGATCTATTAGGGTGAATGGTAAAGAAACGGCACAACTAAATGAAACAGAA
AGTGCAGCATTTCGTTTGAGACAATTCGGTTTTATCTTTCAAAACTTTCAACTAATGCCTGGCTTGACAGCATTCGAAAA
TATTGAATTACCTTTAAAGCTACAGGGGTTGCGCAAAGCAATGAGAAAAGAAAAAGTAAAAAAAATAATGGACAAGGTTG
GTCTAACAGAAGTGGCCGATCACTATCCAAATGAATTATCAGGTGGGCAGCAACAGCGTGTCAGTATTGCACGAGCGCTC
ATCACGAATCCTCCTATTTTGCTGGCAGATGAGCCTACAGGAAGTTTGGATTCAGAAACAGAGCAAGATATTTTGATGCT
TATTCAAAGTTTAAACCGTGAGTTTGGGTTAACCTTTGTCATTATTACTCATGATGAAGAAGTGGCGACAATCGCACATA
GGCGCTTCCGTATGTATGATGGCGAACTGGTAAAGGAGGAAGCTTAA

Protein sequence : 
MIQVENLQHTFLIGKKGKEKKVPVLKGVNFEVNKGEIVAIVGKSGSGKSTLLQVLAGFMKVEHGSIRVNGKETAQLNETE
SAAFRLRQFGFIFQNFQLMPGLTAFENIELPLKLQGLRKAMRKEKVKKIMDKVGLTEVADHYPNELSGGQQQRVSIARAL
ITNPPILLADEPTGSLDSETEQDILMLIQSLNREFGLTFVIITHDEEVATIAHRRFRMYDGELVKEEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-35 46
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-35 46
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-35 46
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-35 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ytrE YP_001699960.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 3e-35 47
ytrE YP_001699960.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 4e-36 47
ytrE YP_001699960.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 4e-38 46
ytrE YP_001699960.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 1e-31 43
ytrE YP_001699960.1 ABC transporter ATP-binding protein NC_012469.1.7686946. Protein 4e-22 42
ytrE YP_001699960.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 4e-35 42