Gene Information

Name : Bsph_4111 (Bsph_4111)
Accession : YP_001699707.1
Strain : Lysinibacillus sphaericus C3-41
Genome accession: NC_010382
Putative virulence/resistance : Unknown
Product : DNA polymerase I
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0749
EC number : 2.7.7.7
Position : 3980472 - 3983099 bp
Length : 2628 bp
Strand : -
Note : has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair

DNA sequence :
ATGACAAAAGAAAAATTACTATTATTGGACGGTAATAGTTTAGCATATCGCGCGTTTTTTGCGTTGCCATTGTTGACGAA
TGATAGTGGTATTCATACAAATGCTGTATACGGCTTTACAACAATGCTACAAAGAATATTAGAGGAAGAACAACCAACGA
AAATTTTAGTGGCTTTTGATGCAGGAAAAACAACTTTCCGTCATGAAACCTTTACAGAATATAAAGGTGGACGACAAAAG
ACTCCACCAGAATTATCGGAGCAATTCCCTTATATACGAAAGCTAATTGATGCTTATGGAATAAAACAATACGAGCAAGA
TTTATATGAAGCGGATGATATTATCGGGACGCTGGCGAAAGAAGCTTCATCACAGGATATGGATGTGATTATCGTTTCTG
GTGACCGTGATTTAACACAGCTTGCGACGGAGCAAGTAACAGTTTATATAACGAAAAAGGGGATTACAGAAATTGAGAGA
AATACTCCGGCCTTTATTGCAGAAAAGTACGGTTTAACGCCGCTACAGATTATTGATATGAAAGGCTTAATGGGTGATTC
TTCAGATAATATTCCTGGTGTGCCAGGTGTTGGTGAAAAGACTGCCGTCAAACTATTAAAAGAGCATGGCTCCGTTGAGG
CACTTTATGAGGCGATGGATACATTGAAAGCTTCTAAAATGAAAGAAAAGCTGGTAGCCAATGAAGAGCAGGCTATTATG
AGTAAGAAACTGGCAACGATTTATACAGATGCACCAATTACCATTTCACTAACTGATCTCGCTTACAACGGACCAAATGA
AGAAGAATTAATGAATGTATGGCGTGAGCTGGGCTTTAAATCACTGCTCGAGAAAAGTGATTTTACTGTGCAAGAGCAAG
AGCAAACACCTTTTGATTTTGAACAAGTTCAAGAAGTACGCCAAGAAGACTTACAAGATGTGATGGCTGTGCATGTGGAG
CTAGAGAATGAACATTACCACACTTGTGCGCTACTAGGGATGGCATTATCTGATGGAACAAAGACTCAATACATTCCTTT
TGAGATTGCGGCAAAATCAGATATACTACGTCGCTGGTTAGAGGATTCATCAAAAATAAAATATATGTCTGATTCCAAAG
CGTCTAAAGCGGCATTAAAACGAGCAGGTATTCAATTAGCTGGCGTTGATTTTGATTTAGTGCTTGCTTCGTATATTAAT
AATCCCGGACTTAGTGGAGATGATGTTGCCACTCTTGCAAGAGAGCTTGGGTATTATGATGTACAAGCAGATGAAACGGT
CTATGGAAAGGGAGCCAAACGTGCTGTACCTGAAATAGATAAGCTTGCTCAGCATGTTAGCCGAAAAGCCTATGCTGTAT
GGTCATTACAGCCGAAGCTAGAGGCATTATTAAAAGAAAATGAACAATTTGACCTTTATAAAGAGTTGGAATTGCCTCTG
GCAGCCATTTTAGGTGAGATGGAAAGTGAAGGCATTACTGTTAACCGTGCCACGCTAGAAAAAATGGGACAAGAGCTTAA
CGATAAGCTTGTCGTACTTGAACAAGAAATTTATGCGGAGGCAGGAGAAACCTTCAATATTAATTCACCAAAACAATTAG
GTGTTATTTTATTCGATAAATTGGGCTTACCTGTTATTAAAAAAACGAAGACGGGCTATTCGACGGCTGCTGATGTATTA
GAAAAATTAAAATCAGAGCATGCCATTATTGAATATATTCTGTTATATCGTCAGCTTGGTAAATTACAATCTACTTATAT
TGAAGGGTTGCTAAAGGAAATACATGAAAAGGATAGCAAGGTGCATACTCGTTTCCAACAAGCTCTAACCGCTACAGGAC
GACTAAGCTCGACAGATCCAAATTTACAAAACATCCCTATCCGTTTAGAGGAGGGACGTAAAATCCGTCAAGCATTTGTC
CCTTCAAAAGAGGATTGGATCCTGTTTTCTGCGGATTATTCGCAAATCGAATTACGTGTACTCGCTCATATGTCGGAAGA
TAAAAACCTTGTAGAGGCCTTCCGTGAAGGGATGGATGTTCATACACGAACAGCGATGGATGTATTCCATGTATCCGAAG
AAGAAGTTGATAGTAATATGCGTCGTGCAGCAAAGGCTGTGAACTTTGGGATTGTTTATGGAATCAGTGATTATGGTCTA
TCACAAAATCTAGATATTACCCGTAAGGAAGCGGCAACTTTTATTGAGAAATATTTCGCTAGTTTCCCAGGCGTCAAACA
GTATATGGATGATATTGTGCAAAATGCGAAGTTCAATGGCTATGTCACAACGATTTTAAATAGACGTCGGTATTTACCAG
ATATCACAAGCTCGAACTTTAATTTAAGAAGTTTTGCTGAGCGTACGGCTATGAATACCCCGATTCAGGGAAGTGCTGCG
GATATTATTAAAAAAGCAATGATTGATATGGATGCTCGACTAAAAAAGGAAAATATGCAGGCAAAGCTACTCTTACAAGT
GCATGATGAATTAATCTTTGAAGCACCTAAGGAAGAGATTGCGATGTTAGAAAAAATTGTACCAGAGGTAATGGAAAATG
CGATTGAGCTTTCCGTACCGCTAAAAGTAGATTTTAACCATGGTTCGACATGGTATGAAGCAAAATAA

Protein sequence :
MTKEKLLLLDGNSLAYRAFFALPLLTNDSGIHTNAVYGFTTMLQRILEEEQPTKILVAFDAGKTTFRHETFTEYKGGRQK
TPPELSEQFPYIRKLIDAYGIKQYEQDLYEADDIIGTLAKEASSQDMDVIIVSGDRDLTQLATEQVTVYITKKGITEIER
NTPAFIAEKYGLTPLQIIDMKGLMGDSSDNIPGVPGVGEKTAVKLLKEHGSVEALYEAMDTLKASKMKEKLVANEEQAIM
SKKLATIYTDAPITISLTDLAYNGPNEEELMNVWRELGFKSLLEKSDFTVQEQEQTPFDFEQVQEVRQEDLQDVMAVHVE
LENEHYHTCALLGMALSDGTKTQYIPFEIAAKSDILRRWLEDSSKIKYMSDSKASKAALKRAGIQLAGVDFDLVLASYIN
NPGLSGDDVATLARELGYYDVQADETVYGKGAKRAVPEIDKLAQHVSRKAYAVWSLQPKLEALLKENEQFDLYKELELPL
AAILGEMESEGITVNRATLEKMGQELNDKLVVLEQEIYAEAGETFNINSPKQLGVILFDKLGLPVIKKTKTGYSTAADVL
EKLKSEHAIIEYILLYRQLGKLQSTYIEGLLKEIHEKDSKVHTRFQQALTATGRLSSTDPNLQNIPIRLEEGRKIRQAFV
PSKEDWILFSADYSQIELRVLAHMSEDKNLVEAFREGMDVHTRTAMDVFHVSEEEVDSNMRRAAKAVNFGIVYGISDYGL
SQNLDITRKEAATFIEKYFASFPGVKQYMDDIVQNAKFNGYVTTILNRRRYLPDITSSNFNLRSFAERTAMNTPIQGSAA
DIIKKAMIDMDARLKKENMQAKLLLQVHDELIFEAPKEEIAMLEKIVPEVMENAIELSVPLKVDFNHGSTWYEAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
polA YP_281523.1 DNA polymerase I Not tested Not named Protein 0.0 52