Gene Information

Name : vanR (Bsph_2928)
Accession : YP_001698587.1
Strain : Lysinibacillus sphaericus C3-41
Genome accession: NC_010382
Putative virulence/resistance : Resistance
Product : regulatory protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2894102 - 2894788 bp
Length : 687 bp
Strand : -
Note : -

DNA sequence :
ATGATACCCAAAATTCTTGTTATAGATGATGATAATGATATTAGAAATTTGATTTCTGTTTACTTAGAAAATGAAGGGAT
GGAGACCATTAAAGTAGCCGATGCGATAAAAGGGCTAGAATTTTTAAAATCAAATGATGTAGATTTAATAATCCTCGATA
TTATGATGCCAAAAATGGATGGTATTCAAGCCTGTTTAAAGATACGAGAAGAAAAAAGTATGCCTATAATTATGCTATCA
GCAAAGTCAGAAGATATAGATAAGATTCAAGGACTGACTTCTGGAGCTGATGATTATTTATCGAAACCATTTAACCCATT
AGAGTTAATTGCAAGGGTTAAATCGCAGCTAAGACGCTCCAGTAAATATAATGTAAACATGAAAAACAATAAGAAAATTA
TAGAAATAGGAAATTTAGTTATAAATACAGATACTCGACAGGTTATTGTACAAGAAAAAGAAATTAGATTAACACCTAAA
GAATTTGATATTTTAGAACTTCTAGCATACAACAAAGGTATTGTACTCAGCATTCAAAAAATATATGAAGCTGTATGGAA
AGAAGATTATTTTAAGTCAGACAACACGGTTATGGTTCATATCACTAATATAAGGGAAAAGATAGAACAAGATCCTAAAC
ATCCAATATATATTAAAACCGTTTGGGGTGTGGGATATAAGATATGA

Protein sequence :
MIPKILVIDDDNDIRNLISVYLENEGMETIKVADAIKGLEFLKSNDVDLIILDIMMPKMDGIQACLKIREEKSMPIIMLS
AKSEDIDKIQGLTSGADDYLSKPFNPLELIARVKSQLRRSSKYNVNMKNNKKIIEIGNLVINTDTRQVIVQEKEIRLTPK
EFDILELLAYNKGIVLSIQKIYEAVWKEDYFKSDNTVMVHITNIREKIEQDPKHPIYIKTVWGVGYKI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
nisR2 YP_006309922.1 NisR Not tested FWisland_1 Protein 1e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
vanR YP_001698587.1 regulatory protein AM180355.1.gene1830. Protein 8e-52 51
vanR YP_001698587.1 regulatory protein AF155139.2.orf0.gene Protein 2e-52 50
vanR YP_001698587.1 regulatory protein FJ349556.1.orf0.gene Protein 3e-53 50
vanR YP_001698587.1 regulatory protein NC_005054.2598277.p0 Protein 1e-54 49
vanR YP_001698587.1 regulatory protein NC_014475.1.orf0.gen Protein 1e-54 49
vanR YP_001698587.1 regulatory protein AF130997.1.orf0.gene Protein 1e-48 48
vanR YP_001698587.1 regulatory protein DQ212986.1.gene4.p01 Protein 2e-49 48
vanR YP_001698587.1 regulatory protein EU250284.1.orf4.gene Protein 5e-50 46
vanR YP_001698587.1 regulatory protein AF162694.1.orf4.gene Protein 7e-49 45
vanR YP_001698587.1 regulatory protein HE999704.1.gene2815. Protein 1e-41 44
vanR YP_001698587.1 regulatory protein NC_009641.5332272.p0 Protein 1e-39 42
vanR YP_001698587.1 regulatory protein NC_013450.8614421.p0 Protein 1e-39 42
vanR YP_001698587.1 regulatory protein NC_007793.3914279.p0 Protein 1e-39 42
vanR YP_001698587.1 regulatory protein NC_003923.1003749.p0 Protein 1e-39 42
vanR YP_001698587.1 regulatory protein NC_002745.1124361.p0 Protein 1e-39 42
vanR YP_001698587.1 regulatory protein NC_009782.5559369.p0 Protein 1e-39 42
vanR YP_001698587.1 regulatory protein NC_002951.3237708.p0 Protein 1e-39 42
vanR YP_001698587.1 regulatory protein NC_002758.1121668.p0 Protein 1e-39 42
vanR YP_001698587.1 regulatory protein NC_012469.1.7685629. Protein 5e-35 42
vanR YP_001698587.1 regulatory protein CP000675.2.gene1535. Protein 5e-35 41
vanR YP_001698587.1 regulatory protein NC_002952.2859905.p0 Protein 2e-39 41
vanR YP_001698587.1 regulatory protein NC_007622.3794472.p0 Protein 1e-39 41
vanR YP_001698587.1 regulatory protein AE016830.1.gene1681. Protein 2e-37 41