Gene Information

Name : fliP (Bsph_1566)
Accession : YP_001697294.1
Strain : Lysinibacillus sphaericus C3-41
Genome accession: NC_010382
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 1654339 - 1655004 bp
Length : 666 bp
Strand : +
Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus

DNA sequence : 
ATGAATGATTTAATCAATATTTTTTCCAATAGCGATCCAACCAACGTCTCAACATCTGTTAAGCTCTTACTACTACTAAC
TGTTTTATCACTGGCACCAAGTATTTTAATTTTAATGACATCCTTTGCTCGTATTGTCATCGTTTTATCCTTTGTGCGTA
CGGCACTGGCTACACAACAAATGCCACCTAATCAGGTGATTGTTGGTTTAGCCTTATTTTTAACGTTCTTCATTATGGCG
CCAACCTTTCAAGAGGTCAATAAAGAGGCTTTGCAACCACTATTTTCTGAAGAAATTGGTTTAGAGGAAGCTTATGATCG
GGCAAGCTTGCCATTTAAAGAATTTATGAGTAAGCATACTAGACAAAAGGATCTAGACTTGTTTTTATCGTACAATCAAG
CAGAAAAACCAGCATCAGTGGAAGAAATCCCACTGACAATGCTTGTGCCAGCATTTGCTTTAAGTGAAATTAAAACAGCA
TTTCAAATAGGTTTTATGATTTTTATTCCATTCCTAGTGATCGATATGATTGTTGCGAGTACATTAATGTCGATGGGGAT
GATGATGTTACCGCCAGTAATGATTTCATTGCCGTTCAAAATCTTATTGTTTGTTCTGGTCGATGGCTGGTATCTCGTCA
TGAAATCGCTACTACAAAGTTTTTAG

Protein sequence : 
MNDLINIFSNSDPTNVSTSVKLLLLLTVLSLAPSILILMTSFARIVIVLSFVRTALATQQMPPNQVIVGLALFLTFFIMA
PTFQEVNKEALQPLFSEEIGLEEAYDRASLPFKEFMSKHTRQKDLDLFLSYNQAEKPASVEEIPLTMLVPAFALSEIKTA
FQIGFMIFIPFLVIDMIVASTLMSMGMMMLPPVMISLPFKILLFVLVDGWYLVMKSLLQSF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 8e-27 43
hrcR AAT96262.1 HrcR Virulence S-PAI Protein 9e-23 41
hrcR AAT96303.1 HrcR Virulence S-PAI Protein 9e-23 41
hrcR AAT96343.1 HrcR Virulence S-PAI Protein 9e-23 41
hrcR ABA47279.1 HrcR Virulence S-PAI Protein 7e-23 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_001697294.1 flagellar biosynthesis protein FliP VFG1259 Protein 8e-46 59
fliP YP_001697294.1 flagellar biosynthesis protein FliP VFG2338 Protein 1e-42 56
fliP YP_001697294.1 flagellar biosynthesis protein FliP VFG2494 Protein 8e-45 56
fliP YP_001697294.1 flagellar biosynthesis protein FliP VFG2016 Protein 5e-42 53