Gene Information

Name : Bsph_1211 (Bsph_1211)
Accession : YP_001696949.1
Strain : Lysinibacillus sphaericus C3-41
Genome accession: NC_010382
Putative virulence/resistance : Virulence
Product : chaperone clpB
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 1299684 - 1301810 bp
Length : 2127 bp
Strand : +
Note : -

DNA sequence :
ATGCAATTTCAACAAACTGATAATCAAAAGCCATTAGAGCAATTTGGACGTAACTTAATAGAAGAAGTTAAAAATGGCAA
AATGGACCCCGTTATTGGGCGCGATGAGGAAATTCGAAATGTCATTCGTATATTAACGCGTAAAACAAAAAATAATCCTG
TATTAATTGGTGAGCCAGGAGTTGGTAAAACAGCGATTGCAGAAGGTTTGGCTCAACGTATTGTGAAGGGTGATGTACCA
GAGGGCTTGAAAGAGTGCGTGCTATACGAGCTGGATATGAGTGCTTTAATAGCAGGAGCAAGCTACCGTGGCCAATTCGA
AGAGCGTTTAAAAGGCGTATTAAAAGAAGTTAAAGATTCAGAAGGGCAAATCATTTTATTTATTGATGAAATTCATACAA
TTGTAGGCGCAGGCAAAACGGATGGTGCTATGGATGCAGGAAATATGTTAAAGCCCATGCTTGCTCGAGGCGAATTACAC
TGTATCGGTGCGACTACATTAGATGAATATCGTCTGTATATTGAAAAAGACCCTGCCTTAGAACGCCGGTTCCAACAAGT
TCTTGTACGTGAGCCTTCTATTGAGGATACTGTGTCTATTTTACGAGGCTTAAAAGAACGCTTTGAATTACATCATGCAG
TACGTATTCATGACCGCGCGATTGTGGCTGCAGCAGAGCTCTCCAATCGTTATATTACAGAGCGATTTTTACCAGATAAA
GCGATTGATTTAATTGATGAGGCATGTGCAATGATTCGTACTGAAATTGATTCAATGCCACAGGAACTAGATGCAGTGAC
TCGTCGTATTATGCAACTAGAGATTGAAGAACAAGCGTTACGGAAGGAAAAGGACGAAGCAAGTAAAAAACGTCTTGAGC
AATTACGAGAAGAATTGACAAAGTTGAAAGAGTCTTCTGAGGGGATGAGGCAGCAATGGGAAGCAGAAAAGGAAAAACTA
CATGAAATTCAGAAAAAACGGGAGACATTAGATAAATACCGTCGTGATTTAGAGGAGGCAGAAAGTAAATATGATTTAAA
TAAAGCTGCTGAATTACGTCATGGTAAAATACCAACACTTGAAAAAGACATTCAGGAACTCGAAAAAGAATTAGAAAGCG
GTGCAGAGTCTCGTATTTTACGTGAAGAAGTGACAGCTGACGAAATCGCCGCAATTGTTTCTCGCTGGACGGGTATTCCT
GTGACAAAACTAGTGGAGGGCGAGCGAGAAAAACTATTGCGTTTAAAGGAAACCTTACATGAACGTGTAGTTGGTCAAGA
TACAGCTGTTCAATTAGTAACAGAGGCTGTATGGCGTGCTCGTGCAGGCATTAAAGATCCGCATCGTCCAATTGGTAGCT
TTTTATTCTTAGGCCCAACAGGTGTTGGTAAAACAGAGCTTGCTAAGGCCCTAGCTGCTCAATTATTTGATTCAGAAGAT
CATTTCATTCGAATTGATATGAGCGAATATATGGAGAAGCATAGCGTGTCTCGATTAGTTGGAGCTCCTCCGGGTTATAT
TGGTTATGAAGAAGGAGGTCAACTCACAGAGGCTGTGCGTCGTAACCCTTATTCTGTTGTTTTACTAGATGAAATTGAAA
AAGCACATCCCGATGTGGCTAATATTTTATTGCAAATTTTAGATGACGGCCGAATTACAGATAGTCAAGGACGTATGGTC
AATTTTACAAATACAGTAGTGATTCTAACATCGAATATCGGCTCTAGTTATTTAATGGAGGCAAAAGATGACGATCCAAC
TGTTGAAGACTTGGTTATGGCTGCTCTCAGACAGCATTTTAAACCAGAGTTATTAAACCGTATGGATGACATTATCTTGT
TCCATGCGTTATCAAATAAACATTTTACAGCTATTGCTTGGAAGTATGTGGAGCAGTTAAGGAAACGAGTGGCAGAACAA
GAAATTACATTAGCTATTGACCAAGAAGTTATCGATTGGGTTGTCCAACAAGGAGCAGATGCCCAATTTGGTGCAAGACC
ACTAAAGCGCTTCGTACAAAGACATATCGAAACAGCTGTGGCTAAGGAACTACTACGGGGTGAGGTATTGCCTGGAGAAA
CATTGCATGTAAAAATGCATGATGGCCATTGTATAGTGGAAAAATAA

Protein sequence :
MQFQQTDNQKPLEQFGRNLIEEVKNGKMDPVIGRDEEIRNVIRILTRKTKNNPVLIGEPGVGKTAIAEGLAQRIVKGDVP
EGLKECVLYELDMSALIAGASYRGQFEERLKGVLKEVKDSEGQIILFIDEIHTIVGAGKTDGAMDAGNMLKPMLARGELH
CIGATTLDEYRLYIEKDPALERRFQQVLVREPSIEDTVSILRGLKERFELHHAVRIHDRAIVAAAELSNRYITERFLPDK
AIDLIDEACAMIRTEIDSMPQELDAVTRRIMQLEIEEQALRKEKDEASKKRLEQLREELTKLKESSEGMRQQWEAEKEKL
HEIQKKRETLDKYRRDLEEAESKYDLNKAAELRHGKIPTLEKDIQELEKELESGAESRILREEVTADEIAAIVSRWTGIP
VTKLVEGEREKLLRLKETLHERVVGQDTAVQLVTEAVWRARAGIKDPHRPIGSFLFLGPTGVGKTELAKALAAQLFDSED
HFIRIDMSEYMEKHSVSRLVGAPPGYIGYEEGGQLTEAVRRNPYSVVLLDEIEKAHPDVANILLQILDDGRITDSQGRMV
NFTNTVVILTSNIGSSYLMEAKDDDPTVEDLVMAALRQHFKPELLNRMDDIILFHALSNKHFTAIAWKYVEQLRKRVAEQ
EITLAIDQEVIDWVVQQGADAQFGARPLKRFVQRHIETAVAKELLRGEVLPGETLHVKMHDGHCIVEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 5e-97 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bsph_1211 YP_001696949.1 chaperone clpB VFG2076 Protein 1e-113 42
Bsph_1211 YP_001696949.1 chaperone clpB VFG2084 Protein 8e-113 41