Gene Information

Name : SPH_0950 (SPH_0950)
Accession : YP_001694304.1
Strain : Streptococcus pneumoniae Hungary19A-6
Genome accession: NC_010380
Putative virulence/resistance : Unknown
Product : integrase core subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 874516 - 875349 bp
Length : 834 bp
Strand : +
Note : identified by match to protein family HMM PF00665

DNA sequence :
ATGACTGAGTTTTCGTTAGTTCTTCTTCTAAAATCTATTAAACTAGCTCGTTGGACCTACTACTATCACTTGAAACAGCT
AGACAAAACAGATAAGGACCAAGAGCTTAAAGCTGAAATTCAATCCATCTTTATCGAACACAAAGGAAATTATGCTTATC
GCCGGGTTCATTTAGAACTAAGAAATCGTGCTTATCTGGTAAATCATAAAAGAGTTCAAGGCTTGATAAAAGTACTCAAT
TTACAAGCTAAAACGCGACAGAAACGAAAATATTCTTCTCATAAAGGAGACGTTGGCAAGAAAGCAGAGAATCTCATTCA
AGGCCAATTTGAAGGCTCTAAAACAATGGAACAGTGCTACACAGATGTGACTGAATTTGCCATTCCAGTAAGTACTCAAA
AGCTTTACTTATCACCAGTTTTAGATGGCTTTAATAGCGAAATTATCGCCTATAATCTTTCAACTTCACCCAACTTAGAA
CAAGTACAAACAATGTTGGAACAGGCATTCACAGAGAAGCACTACGAGAATACGATTCTCCATAGTGACCAAGGCTGGCA
ATATCAACACGATTCTTATCATCGGTTCCTAGAGAGTAAGGGAATTCAAGCATCTATGTCACGCAAGGGAAACAGCCCAG
ACAACGGCATGATGGAATCTTTCTTTGGCATTTTGAAATCGGAGATGTTTTATGGTTATGAGAAGAACTTTAGATCTTTA
GAAAACCTTGAACAAGCTATTGTGGACTATATTGATTACTACAACAATAAACGAATTAAGGTAAAACTAAAAGGACTTAG
CCCTGTGCAATACAGAACTAAATCCTTCGGATAA

Protein sequence :
MTEFSLVLLLKSIKLARWTYYYHLKQLDKTDKDQELKAEIQSIFIEHKGNYAYRRVHLELRNRAYLVNHKRVQGLIKVLN
LQAKTRQKRKYSSHKGDVGKKAENLIQGQFEGSKTMEQCYTDVTEFAIPVSTQKLYLSPVLDGFNSEIIAYNLSTSPNLE
QVQTMLEQAFTEKHYENTILHSDQGWQYQHDSYHRFLESKGIQASMSRKGNSPDNGMMESFFGILKSEMFYGYEKNFRSL
ENLEQAIVDYIDYYNNKRIKVKLKGLSPVQYRTKSFG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SEQ_0791 YP_002746129.1 transposase Not tested ¥ÕSeq2 Protein 1e-92 71
SEQ_1760 YP_002746996.1 transposase Not tested ¥ÕSeq3 Protein 1e-92 71
EFAU085_00737 YP_008394261.1 ISEnfa3, transposase Not tested Not named Protein 4e-54 49
APECO1_1088 YP_853108.1 transposase subunit Not tested PAI IV APEC-O1 Protein 5e-59 47
CDBH8_0905 YP_005159997.1 transposase-like protein Not tested Not named Protein 3e-39 42
CDCE8392_1982 YP_005134513.1 transposase-like protein Not tested Not named Protein 2e-39 42
SE0101 NP_763656.1 transposase Not tested SCCpbp4 Protein 7e-21 41