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Name : SPH_1279 (SPH_1279) Accession : YP_001694600.1 Strain : Streptococcus pneumoniae Hungary19A-6 Genome accession: NC_010380 Putative virulence/resistance : Unknown Product : integrase core subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 1186654 - 1187322 bp Length : 669 bp Strand : + Note : identified by match to protein family HMM PF00665 DNA sequence : ATGACCCTAGAATTACGAAATCGTGGCTTCGTAGTGAACCATAAGAAGGTGCAGCGTCTGATGAAAGTACTTGGTTTAAC GGCTCGAATTCGCCGTAAACGGAAGTATTCTTCATACCAAGGAGAGGTTGGCAAGAAAGCAGATAATCTTATTCAACGTC AATTTGAAGCAACCAAACCAATGCAAAAGTGCTACACAGATGTGACAGAATTTGCCATTCCAGCAAGCAGCCAAAAGCTT TATCTATCACCAGTTTTAGATGGCTTTAACAGCGAAATTATCTCCTACAATCTTTCTACTTCGCCGAACTTAGAACAAGT AAAAACAATGTTGGAACAAGCCTTTACAGAGAACTATTACGAAAATACAATTCTCCATAGTGACCAAGGATGGCAATACC AACACGATTTCTATCATCATTTTTTAAAGAATAAGGGAATCCAACCATCTATGTCACGTAAGGGAAATAGCCCAGATAAC GGTATGATGGAATCTTTCTTTGGCATTCTTAAGTCTGAAATGTTTTATGGTTATGAGAATACGTTTCAGTCACTTGAACA CTTGGAACAAGCTATTGTAGACTATATTGATTACTACAACAACAAACGAATTAAGATAAAACTAAAAGGACTTAGCCCTG TACAATACAGAACTAAATCCTTTGCTTAA Protein sequence : MTLELRNRGFVVNHKKVQRLMKVLGLTARIRRKRKYSSYQGEVGKKADNLIQRQFEATKPMQKCYTDVTEFAIPASSQKL YLSPVLDGFNSEIISYNLSTSPNLEQVKTMLEQAFTENYYENTILHSDQGWQYQHDFYHHFLKNKGIQPSMSRKGNSPDN GMMESFFGILKSEMFYGYENTFQSLEHLEQAIVDYIDYYNNKRIKIKLKGLSPVQYRTKSFA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SEQ_0791 | YP_002746129.1 | transposase | Not tested | ¥ÕSeq2 | Protein | 4e-83 | 80 |
| SEQ_1760 | YP_002746996.1 | transposase | Not tested | ¥ÕSeq3 | Protein | 5e-83 | 79 |
| EFAU085_00737 | YP_008394261.1 | ISEnfa3, transposase | Not tested | Not named | Protein | 6e-47 | 53 |
| APECO1_1088 | YP_853108.1 | transposase subunit | Not tested | PAI IV APEC-O1 | Protein | 2e-50 | 53 |
| CDBH8_0905 | YP_005159997.1 | transposase-like protein | Not tested | Not named | Protein | 5e-36 | 47 |
| CDCE8392_1982 | YP_005134513.1 | transposase-like protein | Not tested | Not named | Protein | 4e-36 | 47 |
| tnp | BAG06206.2 | transposase for ISSau4-like | Not tested | Type-VII SCCmec | Protein | 7e-26 | 42 |
| SE0101 | NP_763656.1 | transposase | Not tested | SCCpbp4 | Protein | 3e-22 | 41 |
