Gene Information

Name : ssb (CLD_A0006)
Accession : YP_001693245.1
Strain :
Genome accession: NC_010379
Putative virulence/resistance : Unknown
Product : single-strand binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 3205 - 3651 bp
Length : 447 bp
Strand : -
Note : identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621

DNA sequence :
ATGAATAAAGTTGTTTTAATAGGTAGACTAACCAAAGATCCTGAATTAAAATTTACTCCAGGGAATGGAACAGCGGTTGC
TAATTTCACTTTGGCTGTAGATAGAAGATTTTCAAAGGATGGCCAGAGAGAAGCGGATTTCATTCCTATAGTAGTATGGG
GAAAGCAAGCAGAATCTACAGCTAACTATATGAGCAAAGGAAAACTTATGGGGGTTAGTGGTAGAATACAAACAAGAAGC
TATGAAGCTAAAGATGGTACAAAAAGATATATAACAGAAGTAATAGCTGAAGAAGTTAAATTTCTTGAGTGGGGAGATAA
AGCTACCACAGATTCATCATATAATAATGGATCAGAATCAAGTTACCAATCAGGACAAGATTTTGGAAATGGAAACAGTT
TTGACGATGATATAATTCCAGTAGATGATGGAGACATACCTTTTTAG

Protein sequence :
MNKVVLIGRLTKDPELKFTPGNGTAVANFTLAVDRRFSKDGQREADFIPIVVWGKQAESTANYMSKGKLMGVSGRIQTRS
YEAKDGTKRYITEVIAEEVKFLEWGDKATTDSSYNNGSESSYQSGQDFGNGNSFDDDIIPVDDGDIPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 1e-27 61
SAV0864 NP_371388.1 ssDNA-binding protein Not tested ¥ÕSa1 Protein 3e-27 61
SAOV_1081 YP_005736576.1 ssDNA-binding protein Not tested ¥ÕSa2 Protein 2e-27 61
SAOV_1956c YP_005737400.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa3 Protein 2e-24 57
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 3e-26 57
EFAU085_00699 YP_008394223.1 single-strand binding protein Not tested Not named Protein 3e-22 50
SEQ_0802 YP_002746140.1 single-strand binding protein Not tested ¥ÕSeq2 Protein 4e-25 49
ssb-3 NP_814291.1 single-strand binding protein Not tested Not named Protein 7e-20 47
ef0030 AAM75236.1 EF0030 Not tested Not named Protein 5e-20 47
ssb-2 NP_814280.1 single-strand binding protein Not tested Not named Protein 1e-25 45
ef0020 AAM75226.1 EF0020 Not tested Not named Protein 9e-26 45