Gene Information

Name : CLD_A0156 (CLD_A0156)
Accession : YP_001693395.1
Strain :
Genome accession: NC_010379
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0675
EC number : -
Position : 104589 - 105677 bp
Length : 1089 bp
Strand : -
Note : identified by match to protein family HMM PF01385; match to protein family HMM PF07282; match to protein family HMM TIGR01766

DNA sequence :
ATGTTAAAAGCATATAAATATAGGTTATATCCTAACGAAAAACAAAAGCAATATTTTGCAAAAACCTTTGGATGCACTAG
ATTTATATATAATAAGATGTTAGCAGATAGAATTAAGTCCTATAAAGAAAATAAAGACTTAGATATTAAAAAGGTGAAAT
ATTCAACTCCTGCACAATATAAAAAAGAGTTTGAGTGGTTAAAAGAAGTGGATAGCTTGGCTTTAGCAAATGCTCAAATC
AATTTAAATAAGGCTTATAAAAATTTTTTCAAAGATAAATCTATTGGATTCCCTAAATTCAAAAGTAAGAAGAGTAATTA
TCGCAATTATACAACTAATAATCAGAAGGGTACTATATTTATAGAAAATGGGCATATTAAAGTTCCTAAATTAAAAACTA
TGATTAGAATAAAACAACATAGACAATTAAATGGATTAATAAAAAGTTGTACTATATCTCAAGTACCCAGTGGGAAGTAT
TACATATCAATTTTAGTTGATACCGAAAATATTCAACTACCTAAAACAAATAAAAAAATTGGTGTGGACGTTGGCCTTAA
AGAATTTGCAATATGTTCTAATGGATATAGACAACCTAACCCAAAACATCTTAGAAAGTCTGAGAAAAGATTGAAGAAGT
TACAAAAAGACCTATCAAGAAAGCAAAAAGTAAGTAATAACAGAAAAAAAGCAAGGTTAAAAGTAGCTAATTTACATGAA
AAAATAGTAAATCAAAGAGCAGATTTCTTACATAAGTTATCAATTAAACTAATTAGAGAAAACCAATCTATAGTTATTGA
GGACTTGAAAGTTAAGAACATGCAACAGAATCACAAACTAGCAAAAGTTATAAGTGAAGCTAGTTGGAGTGAATTTAGAA
GAATGCTAGAATATAAGGCCGAATGGTATGGCAGAGAAATAATAATAGCACCTAGTAATTATGCTAGTTCTCAACTATGT
TCAGAATGTGGGTATAAAAATCCAGAAGTAAAGAATCTAGCACTTAGAGAATGGATATGCCCTCAATGTGGTACGCAACA
TGATAGAGACTTAAATGCTAGTAAAAATTTACTGAAATTAGCTATGTAA

Protein sequence :
MLKAYKYRLYPNEKQKQYFAKTFGCTRFIYNKMLADRIKSYKENKDLDIKKVKYSTPAQYKKEFEWLKEVDSLALANAQI
NLNKAYKNFFKDKSIGFPKFKSKKSNYRNYTTNNQKGTIFIENGHIKVPKLKTMIRIKQHRQLNGLIKSCTISQVPSGKY
YISILVDTENIQLPKTNKKIGVDVGLKEFAICSNGYRQPNPKHLRKSEKRLKKLQKDLSRKQKVSNNRKKARLKVANLHE
KIVNQRADFLHKLSIKLIRENQSIVIEDLKVKNMQQNHKLAKVISEASWSEFRRMLEYKAEWYGREIIIAPSNYASSQLC
SECGYKNPEVKNLALREWICPQCGTQHDRDLNASKNLLKLAM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CPR_0626 YP_697953.1 ISCpe2, transposase orfB Not tested Not named Protein 3e-93 56