Gene Information

Name : OE4587R (OE4587R)
Accession : YP_001690264.1
Strain : Halobacterium salinarum R1
Genome accession: NC_010364
Putative virulence/resistance : Virulence
Product : iron/cobalamin ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 1906165 - 1907085 bp
Length : 921 bp
Strand : -
Note : -

DNA sequence : 
ATGACACGACAACCCGCGAACGACGCGACTGGAACCGACACGCCCGATCGCGGACTCAGCGGCACGGACCTCGTGGTGCG
ATATCCGGGCGGTGACGACCCCGTCATCGACGGCGAGTCCGTGACCGTGCCGGTCGGCGACGTGACCGCGCTCATCGGGC
CGAACGGCAGCGGCAAAAGCACGCTGTTGAACGCGCTGGCGAACAAACACAGCCCGGCCGACGGCACAGTGCTGTTGGAC
GGCCACACCATCGACGAACTGGGCTCCAAGGAGCTCGCGCGGCGACTCGGCTTGCTCTCCCAGGAGAACGTCACGCCGGG
CGGGATCTCGGTGCGCGAACTCGTCGAGCGCGGCCGCTACCCCCACCAGGGGTTTTTCGACTCGCTGACCGACGCGGACC
GCGCCGCCGTCACGGACGCGCTCCGCGTGGCCGGCGTCGACCACCTCAGCGGGCGCGACGTGGGGAGCCTGAGCGGCGGC
CAGAAGCAACTCGTCTGGATCGCGATGGCGCTCGCCCAGGACACCGACGTGTTGTTGCTGGACGAGCCGACGACGTTCCT
GGACCCACACCACCAACTCGAAGTGATGGACATCATCCAGGCGCTGCGCGACGACCACGACACGACGGTCGTGGTCGTCC
TACACGACATCAATCAGGCCGCGCGCTACGCCGACCACGTGATCGCGCTCAAGGACGGCACGATCCACGCCCGTGGGCAG
CCGGCCGACGTCGTCACGAAAGAGACGCTGCGAACGGTGTTCGACATCGAAGCCACGGTGTCGACCACCAGCCACGGCAT
GCAAGTGGTGCCCATTGAGGCGTTACACGACGAGGACGGCACCGACCACGAGCACGCGCCCGGGAGTCGGACGCCCACCC
GGGAGACCGCTGCGGACGGCGGGACACCGCCCGCGGAGTGA

Protein sequence : 
MTRQPANDATGTDTPDRGLSGTDLVVRYPGGDDPVIDGESVTVPVGDVTALIGPNGSGKSTLLNALANKHSPADGTVLLD
GHTIDELGSKELARRLGLLSQENVTPGGISVRELVERGRYPHQGFFDSLTDADRAAVTDALRVAGVDHLSGRDVGSLSGG
QKQLVWIAMALAQDTDVLLLDEPTTFLDPHHQLEVMDIIQALRDDHDTTVVVVLHDINQAARYADHVIALKDGTIHARGQ
PADVVTKETLRTVFDIEATVSTTSHGMQVVPIEALHDEDGTDHEHAPGSRTPTRETAADGGTPPAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-45 47
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 8e-47 46
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 8e-47 46
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 9e-47 46
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 9e-47 46
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 7e-44 44
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-47 43
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-47 43
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-47 43
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-47 43
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 7e-46 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
OE4587R YP_001690264.1 iron/cobalamin ABC transporter ATP-binding protein BAC0164 Protein 7e-46 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
OE4587R YP_001690264.1 iron/cobalamin ABC transporter ATP-binding protein VFG1042 Protein 6e-46 47
OE4587R YP_001690264.1 iron/cobalamin ABC transporter ATP-binding protein VFG0925 Protein 1e-51 47