|
Name : lpdA (OE4116F) Accession : YP_001689993.1 Strain : Halobacterium salinarum R1 Genome accession: NC_010364 Putative virulence/resistance : Unknown Product : dihydrolipoamide dehydrogenase ( glycine cleavage system protein L and E3 component of branched-chain amino acid dehydrogenase) Function : - COG functional category : C : Energy production and conversion COG ID : COG1249 EC number : 1.8.1.4 Position : 1638069 - 1639493 bp Length : 1425 bp Strand : + Note : - DNA sequence : ATGGTTGTCGGAGACATCTCGACTGGGACGGACGTCGCGGTCGTTGGCGCTGGCCCCGGTGGCTACGTGGCGGCGATCCG CGCGGGACAGCTCGGCCTCGACGTGACGCTCGTCGAGAAGGACGCCTACGGCGGCACCTGCTTGAACTACGGCTGCATCC CGTCGAAGGCGATGATCACGGCGTCGGGCGTCGCCCACGAGGCGGGCCACGCCGAGGAGATGGGCGTGTACGCCGACCCC GACGTGGACGTGGCGGAGATGGTCGACTGGAAGGACGGCGTCGTCGACCAGCTCACGGGCGGCGTGGAGAAGCTCTGCAA GGCCAACGGCGTGAACCTCATCGAGGGGCGCGCGGAGTTCGCGGGCAGCGACAAGCTGCGGGTCGTGCACGGCGGCGACG GCCAGGGCTCGGAGACCATCGAGTACGAGCACGCCATCGTGTCGACGGGCTCTCGGCCCATCGAGGTGCCGGGCTTCGAC TTCGGCGACGACCCCGTGTTGGATTCGCGGCAGGCGCTGGCGATGGCGGAGCTGCCGTCGTCGATGGTGATCGTCGGCGG CGGCTACATCGGCATGGAGCTGTCGACGGTGTTCGCGAAGCTCGGCGTGGACGTGACCGTCGTGGAGATGCTGGATGGCA TCCTGCCACAGTACGGCGACGACATCGCGCGCCCCGTGAGACAGCGCGCCGAGGAACTCGGCATCGACTTCCACTTCGGC CTCGCGGCCGACAGCTGGACGGACACCGACGACGGCATCGTGGTCACCGCCGCCGACGAGGACGGCGAGGAGACCGAGTT CGAGACCGAGAAGGTGCTCGTGGCGGTCGGCCGCCAGCCAGTCACCGACACGCTGAACCTGGACGCCGTCGGCCTCGAAC CGAACGACGATGGGCGCCTGGAGACCGACCACGAGGCCCGCACCGACGTCGAGAACGTCTTCGCGATCGGCGACGTCGCG CCCGGCCCGATGCTCGCGCACAAGGCCAGCAAGGAGGGCGAGGTCGCCGCGGAAGTCATCGCGGGCGAGCCGGCGGCCCT GGACTACCAGGCCGTGCCGGCGGCGGTGTTCACCGACCCCGAGATCGGGACCGTCGGGCTCACCGAGGACGACGCCGCCG CGCAGGGCTTCGACCCGGTCGTCGGGACGTTCCCGTTCAACGCCAGCGGGCGCGCGCTCACCACGGGCCACGACGACGGC TTCGTGGAGGTCGTCGCCGACGAGGAGTCGGGGTTCCTGCTGGGCGCGCAGATCGTCGGCCCGGAGGCCAGCGAGCTCGT CGCCGAGCTCGGCCTCGCGATCGAGATGGGGGCCACCCTGGAGGACGTCGCGTCCACCATCCACACGCATCCGACGCTGT CCGAGGCCACGATGGAGGCCGCCGAGCACGCGCTCGGCCACGCCGTCCACACGCTGAACCGGTAA Protein sequence : MVVGDISTGTDVAVVGAGPGGYVAAIRAGQLGLDVTLVEKDAYGGTCLNYGCIPSKAMITASGVAHEAGHAEEMGVYADP DVDVAEMVDWKDGVVDQLTGGVEKLCKANGVNLIEGRAEFAGSDKLRVVHGGDGQGSETIEYEHAIVSTGSRPIEVPGFD FGDDPVLDSRQALAMAELPSSMVIVGGGYIGMELSTVFAKLGVDVTVVEMLDGILPQYGDDIARPVRQRAEELGIDFHFG LAADSWTDTDDGIVVTAADEDGEETEFETEKVLVAVGRQPVTDTLNLDAVGLEPNDDGRLETDHEARTDVENVFAIGDVA PGPMLAHKASKEGEVAAEVIAGEPAALDYQAVPAAVFTDPEIGTVGLTEDDAAAQGFDPVVGTFPFNASGRALTTGHDDG FVEVVADEESGFLLGAQIVGPEASELVAELGLAIEMGATLEDVASTIHTHPTLSEATMEAAEHALGHAVHTLNR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SE0077 | NP_763632.1 | dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 | Not tested | SCCpbp4 | Protein | 9e-77 | 43 |
