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Name : serS (OE3893F) Accession : YP_001689863.1 Strain : Halobacterium salinarum R1 Genome accession: NC_010364 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 1513686 - 1515068 bp Length : 1383 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTGTCCCGACAATTCGTCCGCGAGCACCCCGAGAAAGTGCGGGACGCCCTCGATGCGAAGGGCGTGGACGCGGACCT CGACCGGATCCTGGAGGTTGACGAGGAGTGGCGCGAACTGAAAGCGCGGGGCGACGAGCTCCGCCACGACCGCAACGAGG TGTCCTCGAAGATCGGCGAGCTCAAGCAGGCCGGCGACGAGGACGCCGCCCAGGAGGCAATCGAGCGCTCGCAGGCGCTC AAAGACGAGTTGGCGGACGTCGAGGCGCGCGCCGACGACCTGGAGGCGGAGCTCGAACGCCTGCTGTTGACGCTGCCGAT GGTGCCCGACGAGGACGCGCCGGTCGGCGACAGCGAGGCCGAGAACGTCGAGCGCCGCCGCGAGGGGTTCGACGACCGCC GCGATCTGCCCGAGTCGGTGGTGCCACATTACGACCTCGGCGAGGAGTTGGACATCCTGGATTTCGAGCGCGGCGCGAAG GTCTCCGGCGGCGGGTTCTACTTCTCGAAGGGGGCGGGCGCGCGCCTGGAACACGCCCTCGTGCAGTTCATGCTCGACGT GCACCGCGAACAGGGTTACGAGGACGTGTTCCCACCGATGCCGGTGTCGGCGCGGTCGATGGAGGGCACCGGGCAGTTCC CGAAGTTCGTCGAGGACGCCTACCGCATCGGCGGCGAGAACGACGCGGACTACGACGACGACGACCTCTGGCTGCTGCCG ACCGCGGAGGTCCCGGTGACGAACATGTACCGGGACGAGATCCTGCTGGACGACGACCTCCCGGTGAAACACCAGGCGTA CTCGCCGAACTTCCGCCGGGAGGCCGGCGAGCACGGCACGGAGACCCGGGGGATCGTGCGCGTCCACCAGTTCAACAAGG TCGAGCTCGTGAACTTCGTGCGCCCGGAGGACTCCGCCGAGCGGTTCCACGGCCTGCTGGACGAGGCGGAGGCGGTGTTG CGGCGGCTCGATCTGCCGTACCGCGTCCTGGAGATGTGCACCGGTGACATGGGGTTCACGCAGGCCAAAAAGTACGACAT CGAGGTGTGGGCGCCCGGCGACGACATGGACGGCGGCCCCGAAATGGGGGGCCGGTGGCTGGAGGTGTCGTCGGTGTCGA ACTTCAAGGACTTCCAGGCGCGGCGGGCCGACATCCAGTACCGGCCCGAGCGCCACGAGTCCGCCGAGCATCTGCACACC CTGAACGGATCGGGGGTGGCGGTGCCCCGCGTGCTGGTGGCGATCCTGGAGTACTACCAGAACGACGACGGCACGGTAAC GGTACCGGAGGCGCTGCAGCCGTACATGAACGGCCAGACGCGCATCGAGGGCTCCCGGAAGGTCGGCGAGTCCGCGCTGG GCGACGGCGACCGCGAGGCGTGA Protein sequence : MLSRQFVREHPEKVRDALDAKGVDADLDRILEVDEEWRELKARGDELRHDRNEVSSKIGELKQAGDEDAAQEAIERSQAL KDELADVEARADDLEAELERLLLTLPMVPDEDAPVGDSEAENVERRREGFDDRRDLPESVVPHYDLGEELDILDFERGAK VSGGGFYFSKGAGARLEHALVQFMLDVHREQGYEDVFPPMPVSARSMEGTGQFPKFVEDAYRIGGENDADYDDDDLWLLP TAEVPVTNMYRDEILLDDDLPVKHQAYSPNFRREAGEHGTETRGIVRVHQFNKVELVNFVRPEDSAERFHGLLDEAEAVL RRLDLPYRVLEMCTGDMGFTQAKKYDIEVWAPGDDMDGGPEMGGRWLEVSSVSNFKDFQARRADIQYRPERHESAEHLHT LNGSGVAVPRVLVAILEYYQNDDGTVTVPEALQPYMNGQTRIEGSRKVGESALGDGDREA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 7e-76 | 47 |
