|
Name : Caul_0554 (Caul_0554) Accession : YP_001682185.1 Strain : Caulobacter sp. K31 Genome accession: NC_010338 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4584 EC number : - Position : 603501 - 605006 bp Length : 1506 bp Strand : - Note : PFAM: Integrase catalytic region; KEGG: swi:Swit_5140 integrase, catalytic region DNA sequence : GTGGAGACGGTGGCGAAGATCCGGCGCGAGCATTTCGGCCGGGGCAAGGGCATGAAGACGATCGCGCGGGAGCTGGGGCT ATCGCGCAACACGGTGCGCAAGGTGCTGAGGTCGGGCGAGACCTCGTTCGAGTATGAGCGGACAGAGCAGCCGCATCCCA AGCTGGGGGCCTTCATCGGGCGGCTGGAGGCGATGCTGGAGACCAACGCGTCCGGCGCCAGGAAGGACCGGCTGACGCTG ACGCGGATTGCCGACCTGTTGGGCCGCGAGGGTTATGACGGCGGCTACGATGCGGTCCGCCGATACGCTGGCCGTTGGAC AGCCAAGCGCCGGGGCGTGAGCTCGCCGGTCGAGGCGTTCGTGCCGCTGAGCTTTGCGCCGGGCGACGCCTACCAGTTTG ACTGGAGCCACGACCAGGTCGAGATCGGCGGGACGCCGCTGACGGTGAAAGTGGCGCACCTGCGGCTCTGCCACAGCCGT CGGTTCTACATCCGGGCCTATCCGCGCGAGACCCAGGAGATGGTGTTCGACGCCCACACCCGGGCCTTTGCGCTGTTTGG CGGGGTCACGGCGCGCGGGATCTACGACAACATGAAGACCGCGGTGGACGCGGTGTTCGCCGGCAAGGCGCGGCGCTTCA ACCGGCGCTTCGAACAGATGTGCTCGCACTATCTGATCGAGCCGGTGGCCTGCACGCCGGCTTCGGGCTGGGAGAAGGGT CAGGTCGAGAACCAGGTGGGCTACGCCCGCGACAACATCTTCAAGCCGCGCCTGCGCTTCAGGACGCTGGAAGAGCTCAA CGGCTGGCTGGAGGCCGAGTGCGAGCGCCGGGCCCGGAGCGATCGGCATCCCGAGCAGCGCGATCGGACGGTCTGGGAGG TGTTTGAGGCCGAGAAGGCGTTCCTGGCGCCATTTGCTGGAACCTTCGACGGCTTCCACCAGATCGAGGCCGTGGCCCAG GCCACCTGCCTGATCAGCTTCGACCGGAACCGCTACTCGGTGGCGGCCAGGGCGGCGCGCCGGGCGGTGCAGATCCGGGC CTATGCCGACAGGATCGTGGTGCTCTGCGACGGCGAGCTGGTGGCCGAGCACCCGCGCAGCTTCGGCCGCGACCGGACGA TCTACGATCCCTGGCACTACCTGCCGGTCTTGGCGCGCAAGCCAGGCGCACTGCGCAACGGCGCGCCGTTCCAGGACTGG TCGCTGCCGCCGGCCCTGACCCGCCTGAGGAAGAAACTGGGCGCCGGCGACGAGGCCGACCGCCGCTTCGTGCGGGTGCT GGCCGCGGTGCTCGATGATGGCCTGGAGGCGGTCGACGAGGCGGTGCGCGAGGCCCTAGACGCTGGCGTCTCCAGCGACG ATCTGATCCTCAACATCCTGGCCCGACGGCGTGAGCCGCCTAAACCTCCGGGGATCACAACATCTGAGGCGTTGCAGCTG CGATATCCGCCGGTCGCCGACTGCGCCCGTTATGACCGCCTAAGAGGCTCCCATGCAACGGCATGA Protein sequence : METVAKIRREHFGRGKGMKTIARELGLSRNTVRKVLRSGETSFEYERTEQPHPKLGAFIGRLEAMLETNASGARKDRLTL TRIADLLGREGYDGGYDAVRRYAGRWTAKRRGVSSPVEAFVPLSFAPGDAYQFDWSHDQVEIGGTPLTVKVAHLRLCHSR RFYIRAYPRETQEMVFDAHTRAFALFGGVTARGIYDNMKTAVDAVFAGKARRFNRRFEQMCSHYLIEPVACTPASGWEKG QVENQVGYARDNIFKPRLRFRTLEELNGWLEAECERRARSDRHPEQRDRTVWEVFEAEKAFLAPFAGTFDGFHQIEAVAQ ATCLISFDRNRYSVAARAARRAVQIRAYADRIVVLCDGELVAEHPRSFGRDRTIYDPWHYLPVLARKPGALRNGAPFQDW SLPPALTRLRKKLGAGDEADRRFVRVLAAVLDDGLEAVDEAVREALDAGVSSDDLILNILARRREPPKPPGITTSEALQL RYPPVADCARYDRLRGSHATA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| istA | AAN62228.1 | putative transposase | Not tested | PAGI-3(SG) | Protein | 4e-111 | 50 |
| unnamed | AAN85144.1 | unknown | Not tested | Hrp PAI | Protein | 2e-80 | 45 |
| EC042_4098 | YP_006098381.1 | transposase | Not tested | Tn2411 | Protein | 3e-77 | 44 |
