Gene Information

Name : Caul_0452 (Caul_0452)
Accession : YP_001682087.1
Strain : Caulobacter sp. K31
Genome accession: NC_010338
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 495900 - 496760 bp
Length : 861 bp
Strand : -
Note : PFAM: Integrase catalytic region; KEGG: rso:RSp0548 ISRSO8-transposase orfB protein

DNA sequence :
ATGAAGTTCGGGTTCGTCGATGAGCACCGCGGCGTCTGGCCGGTTCGGATGATGTGTCGGGTCCTGGGTCTGTCGGCCAG
CGGCTACTACGCCTGGCGCGTCAGGCCCGAGAGCCGGCGGGCGGCGGCCAACCGCGCCCTGATCGAGGACATCCGCCTGA
TCCATGCCGAGAGCTGCGGGACCTATGGCTCGCCGCGCGTCCACGCCGTCTTGCGCGGCCATGGTCGCCGTGTCGGACGC
TCGCGGGTCGAGCGGCTGATGCGCCGCGCCGGCCTGCGCGGGCTGGCCGCATTACCCCGCCGCACCCGGACGACCGACAG
CCGCCATGGCTATCCGATCGCGCCCAACAGGCTCGCCCGTCACTTTCAGGCGGCGGCGCCTGGCCAGGTCTGGCTCGCCG
ACCTGACCTATATTCCGACCGGGGAAGGCTGGCTCTACCTGGCCGGCATCCTCGACATGCACACCCGCAAGCTCGTCGGC
TGGTCGATGCGCGACACCTTGCACGCCCAGATCGCCTTGGACGCCCTGACCATGGCCATCGCGCGCCAAAAACCCGCGCC
AGGCCTTATTCATCATTCGGATCGCGGCATCCAATACGCCGCCGAGACCTATCGTTCGGCCCTGGCCCGGTCAGGGATCA
CCCCGTCCATGAGCCGCAAGGGCGATTGCTGGGACAACGCGCCCATGGAGAGCTTCTTCCATACCCTCAAGACCGAGCGG
GTCCATCATCGGATCTACGCCACCCGCGCCGAGGCCCGGCGCGATCTGTTCGGCTATATCGAGGGCTTCTACAATTCACG
CCGCCTGCACTCGGCTCTGGGCTATATCAGCCCCGCCGAGGCCGAACGCAGAGCGGCTTAA

Protein sequence :
MKFGFVDEHRGVWPVRMMCRVLGLSASGYYAWRVRPESRRAAANRALIEDIRLIHAESCGTYGSPRVHAVLRGHGRRVGR
SRVERLMRRAGLRGLAALPRRTRTTDSRHGYPIAPNRLARHFQAAAPGQVWLADLTYIPTGEGWLYLAGILDMHTRKLVG
WSMRDTLHAQIALDALTMAIARQKPAPGLIHHSDRGIQYAAETYRSALARSGITPSMSRKGDCWDNAPMESFFHTLKTER
VHHRIYATRAEARRDLFGYIEGFYNSRRLHSALGYISPAEAERRAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 1e-39 47
unnamed AAF09030.1 unknown Not tested SHI-O Protein 1e-39 47
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 1e-39 47
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 9e-40 47
unnamed AAF09022.1 unknown Not tested SHI-O Protein 5e-40 47
unnamed AAQ07468.1 TnpI-like protein Not tested Not named Protein 5e-40 47
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 1e-39 47
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 1e-39 47
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 8e-40 47
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 6e-43 44
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 6e-43 44
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 6e-43 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Caul_0452 YP_001682087.1 integrase catalytic subunit VFG1706 Protein 5e-40 47