|
Name : Caul_3175 (Caul_3175) Accession : YP_001684800.1 Strain : Caulobacter sp. K31 Genome accession: NC_010338 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 3439154 - 3440989 bp Length : 1836 bp Strand : - Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGAACGTTCAACTGCCCATCAAAGACGCCATCGGCGCGATCCCGACCGGGGAGCGCCCCGGTTCGCGCAAGGTCTATCA GGCCGGCTCGCTGTTCCCCGACATCCGGGTGCCGTTCCGTGAGGTCGCTGTCCATCCCAGCGCCAACGAACCGCCGGTCA CCATCTATGACCCGTCCGGCCCCTATACCGACCCGCACGCCAAGATCGACATCGAGCAGGGCCTGGAGCGGTCGCGCGAG CCGTGGATCATCGCCCGCGGCGACTGCGAGTTGGTGGCCACCCCCCGGGAGGTGAAGCCCGAGGACAACGGCTTCGCCCA GGGCAAGCACCTGGCGCCCCAGTTCACCGCCAAGCGCCCGATCTTCAAGGGCGCGCAAGGCAAGCTGGTCACCCAGCTGG AATACGCCCGCGCCGGCATCGTCACCGCCGAGATGGAATATGTGGCCATCCGCGAGAACCTGCGCCGCGAGCAGGACCGC CCGTGCGTGCGCGACGGCGAGGACTTCGGCGCCTCGATCCCCGACTTCGTGACCCCCGAATTCGTCCGCCAGGAAGTGGC GCGCGGCCGGGCCATCATTCCGGCCAACATCAACCACGGCGAGCTGGAGCCGATGGCGATCGGCCGCAATTTCCTGGTCA AGATCAACGCCAACATCGGCAACAGCGCCGTGCTTTCCACCGTGGCCGACGAGGTCGACAAGCTGGTGTGGGCCACGCGC TGGGGCGCCGACACGGTCATGGACCTGTCGACCGGCCGCAACATCCACAACATCCGCGACTGGATCATCCGCAACAGCCC GGTGCCGATCGGCACGGTGCCGATCTACCAGGCGCTGGAGAAGGTCAACGGCGTGGCCGAGGACCTGAACTGGGAAGTCT TCCGCGACACCCTGATCGAGCAGGCCGAGCAGGGGGTGGACTATTTCACCATCCACGCCGGCGTCCGTCTTCCGTTCATC CCGCTGACCGCCAAGCGGGTGACGGGCATCGTCTCGCGCGGCGGCTCGATCATGGCCAAGTGGTGCCTGGCACACCACAA GGAGAACTTCCTCTACGAGCGCTTCGAGGACATCTGCGAGATCATGCGCAGCTACGACGTGTCGTTCTCGCTGGGCGACG GCCTGCGTCCGGGCTCGACGGCCGACGCCAATGACGAGGCCCAATTCGCCGAGCTGCGCACCCTGGGCGAGCTGACCAAG GTGGCCTGGAAGCACGGCGTGCAGGTGATGATCGAAGGGCCGGGCCACGTCGCCATGCACAAGATCAAGGCCAACATGGA CGAGCAGCTCAAGCACTGCCACGAGGCCCCCTTCTACACGCTCGGTCCGTTGACGACGGACATCGCCCCTGGCTACGACC ACATCACCAGCGCCATCGGCGCGGCGATGATCGGCTGGTTCGGCACGGCCATGCTCTGCTACGTGACGCCCAAGGAGCAC CTGGGCCTGCCCGACCGCGACGACGTCAAGACCGGCGTCATCACCTACAAGCTGGCCGCCCACGCCGCCGACCTGGCCAA GGGTCACCCCGGCGCGGCCATGTGGGACGACGCCATCAGCCGGGCGCGGTTCGAGTTCCGCTGGGAGGACCAGTTCAACC TGGGCCTCGACCCCGAGACCGCCCGGGCCTTCCACGACGAGACCCTGCCCAAGGAGGCGCACAAGACCGCGCACTTCTGC TCGATGTGCGGTCCCAAGTTCTGCTCGATGAAGATCAGCCAGGAAGTCCGCGAATTCGCGGCCGGCATGGCCCCCAACTC CATCGAACAGGGCATGGCGGAGATGAGCGACAAGTTCCGCGAACAGGGTTCGGAAATCTATCTGAAGACGGAATAG Protein sequence : MNVQLPIKDAIGAIPTGERPGSRKVYQAGSLFPDIRVPFREVAVHPSANEPPVTIYDPSGPYTDPHAKIDIEQGLERSRE PWIIARGDCELVATPREVKPEDNGFAQGKHLAPQFTAKRPIFKGAQGKLVTQLEYARAGIVTAEMEYVAIRENLRREQDR PCVRDGEDFGASIPDFVTPEFVRQEVARGRAIIPANINHGELEPMAIGRNFLVKINANIGNSAVLSTVADEVDKLVWATR WGADTVMDLSTGRNIHNIRDWIIRNSPVPIGTVPIYQALEKVNGVAEDLNWEVFRDTLIEQAEQGVDYFTIHAGVRLPFI PLTAKRVTGIVSRGGSIMAKWCLAHHKENFLYERFEDICEIMRSYDVSFSLGDGLRPGSTADANDEAQFAELRTLGELTK VAWKHGVQVMIEGPGHVAMHKIKANMDEQLKHCHEAPFYTLGPLTTDIAPGYDHITSAIGAAMIGWFGTAMLCYVTPKEH LGLPDRDDVKTGVITYKLAAHAADLAKGHPGAAMWDDAISRARFEFRWEDQFNLGLDPETARAFHDETLPKEAHKTAHFC SMCGPKFCSMKISQEVREFAAGMAPNSIEQGMAEMSDKFREQGSEIYLKTE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 66 |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 66 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 65 |
