Gene Information

Name : Caul_2089 (Caul_2089)
Accession : YP_001683715.1
Strain : Caulobacter sp. K31
Genome accession: NC_010338
Putative virulence/resistance : Virulence
Product : general secretory pathway protein E
Function : -
COG functional category : N : Cell motility
COG ID : COG2804
EC number : -
Position : 2237252 - 2238931 bp
Length : 1680 bp
Strand : +
Note : KEGG: mca:MCA1114 general secretion pathway protein E; TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase

DNA sequence :
ATGGTCAGTGTCGAGCGGCGATCCTTTCAAAACTTTATTATAAACAGCGATCTGATTACCGCTGAGTCCTTGGTGCGGGC
CAAGGCGGTTCAGTGCGAGAGCGGCGAGCGCATGGACGCGGTCCTGACGCGGCTGGGGTTGGTCACCGAGCGCGCCTTGG
CCGACGCTTTGGCCAAGGCGACGGGCCTATCGCAAGTCGATGGCGACGATTTTCCGGCTTCGGCGGTCGGCGGGGAGCGC
GTTTCGCCGCGCTTCCTGCGCGAGACCAAGGCCATTCCCCTCGCCCTCGACGACGAGGCGCTGCGCGTGGCCCTGATCGA
TCCGCTCGACGACTACGTGATCGCGGCGCTGAGCTACGCGTTCGAGCGGCCCGTGAAGCCGGCGGTCGCGCGGGCTGGCG
ATCTGGACGCGGCGCTGGACCGTCTCTACGGGCCGGCGACCGACGCGGTCGCCGAGGCGGCCGACGAGGCCGACGAGGCC
GACCTCGATCGGCTGAAGGATCTGGCCAGCGACGCGCCGGTGGTGCGCGCGGTGAACGCCCTGATTTCGCGCGCCGCCGA
ATTGCGTGCGTCCGACATCCATGCCGAGCCCACCGAGGACGGCCTGAAGGTACGCTTCCGGATCGATGGAGTGCTGGTCG
ATCAGGAAATCCTGCCTCACCAGGTGAAGGCCGCCTTCGTCTCGCGCGTGAAGGTCCTGGCCAATCTGAACATCGCCGAA
CGCAGGCTGCCGCAGGACGGGCGGATGAGGCTGGCGGTGCGAGGGCAGGAGATTGACCTGCGGGTTGCCACCGCGCCGAC
CCTGCACGGCGAAAGCGTGGTGCTGCGGCTCCTCGACCGCTCGAACCTGTCGCTGGACTTCGACGCCCTGGGATTCGACG
ATACGATCCTGCCGTCGTTCCAGGATGTCCTGGCGCGGCCCCACGGAATCGTTCTGGTCACCGGTCCCACCGGCAGCGGC
AAGACGACCACGCTTTACGCCGCGCTCGCGTCGCTGAACTCGCCCACGCGCAAGATCCTCACCATCGAAGACCCGATCGA
ATACCGGCTGGCCGGCGTGAACCAGACGCAGGTCAGCCCGCAGATCGGCCTGACCTTCGCCACCGCCCTGCGGTCCTTCC
TGCGTCAGGACCCCGACGTGATGATGGTGGGCGAGATCCGGGACCTGGAGACCGCGCAGGTCGCGGTCCAGTCGGCCCTG
ACCGGCCACACCATCCTGTCGACCCTGCACACCAACAGCGCGGCCGCCGCGGTGACCCGGCTGATCGACATGGGCATGGA
GCCCTTCCTGATCAGCTCCACCGTCAATGCCGTCCTGGCCCAGCGGCTGGTGCGCAGGTTGTGCCGCAGCTGTCGCACGT
CGCACGTGGCCGATGCGCGAGAGCTGTCGGTGCTGGAGGCCCAGGCCGGCGAACGGGGCCGCGACCCGATCCGTCTGTGG
AGCGCGCCCGGCTGCGCCGATTGCGGCCATGCCGGCTTCAAGGGGCGGCTGGCCATCCTGGAACTGTTGCCGGTGGACGA
CAGGATCGCGCGCCTAGTGCTGGCCCGCGCCGAGGCTCGCGAGATCGAGCGCGCCGCGGTCGCGGCCGGCATGCGCACGA
TGCTGCAGGACGGCATGGCCAAGGCGATGGCGGGTCTGACAACCATCGACGAAGTCCTGCGCGTGACAAGGGAGGACTAA

Protein sequence :
MVSVERRSFQNFIINSDLITAESLVRAKAVQCESGERMDAVLTRLGLVTERALADALAKATGLSQVDGDDFPASAVGGER
VSPRFLRETKAIPLALDDEALRVALIDPLDDYVIAALSYAFERPVKPAVARAGDLDAALDRLYGPATDAVAEAADEADEA
DLDRLKDLASDAPVVRAVNALISRAAELRASDIHAEPTEDGLKVRFRIDGVLVDQEILPHQVKAAFVSRVKVLANLNIAE
RRLPQDGRMRLAVRGQEIDLRVATAPTLHGESVVLRLLDRSNLSLDFDALGFDDTILPSFQDVLARPHGIVLVTGPTGSG
KTTTLYAALASLNSPTRKILTIEDPIEYRLAGVNQTQVSPQIGLTFATALRSFLRQDPDVMMVGEIRDLETAQVAVQSAL
TGHTILSTLHTNSAAAAVTRLIDMGMEPFLISSTVNAVLAQRLVRRLCRSCRTSHVADARELSVLEAQAGERGRDPIRLW
SAPGCADCGHAGFKGRLAILELLPVDDRIARLVLARAEAREIERAAVAAGMRTMLQDGMAKAMAGLTTIDEVLRVTRED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspE YP_854406.1 type II secretion protein GspE Not tested PAI I APEC-O1 Protein 5e-77 50
gspE CAE85233.1 GspE, hypothetical type II secretion protein Not tested PAI V 536 Protein 4e-77 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Caul_2089 YP_001683715.1 general secretory pathway protein E VFG0182 Protein 1e-80 52
Caul_2089 YP_001683715.1 general secretory pathway protein E VFG2048 Protein 2e-77 50
Caul_2089 YP_001683715.1 general secretory pathway protein E VFG1876 Protein 5e-80 49