Gene Information

Name : fliI (Caul_1023)
Accession : YP_001682651.1
Strain : Caulobacter sp. K31
Genome accession: NC_010338
Putative virulence/resistance : Virulence
Product : flagellum-specific ATP synthase
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : -
Position : 1082913 - 1084250 bp
Length : 1338 bp
Strand : -
Note : involved in type III protein export during flagellum assembly

DNA sequence :
TTGCGTAGCCTGATCGCCGCCGTCGAACGTATCGATCCGCTGACTATCTTCGGTCGCGTCGCCGCCGTGAACGGCCTCCT
GATCGAGGCGCGCGGCGGGCTGACCCGTCTCGCGGTCGGCGCGCGCGTCGAGATCGACCGGCTGGCCGCGCCGCCGTTGC
CGGCCGAGGTCGTCGGCTTCCGCGAAACCCGCGCCCTGCTGATGCCGTTCGGCCCTGTCGAGGGCGTGGCCCCCGGCGCC
GAGATCAAGATCATGCCCGAGGGCGCCGTGGTGCGTCCGACCAAGGCCTGGCTGGGCCGGATCATCAACGCCTTCGGCGA
GCCCATCGACGGGCTGGGTCCGCTGCCGCAGGGCGAGGTTCCCTACCCCCTGAAGACCCCGCCCCCGCCGGCCCATGCCC
GTGGCCGGGTGGGCGAGCGCCTGGACCTGGGCGTGCGGTCGATGAACGTCTTCACCACCACCTGCCGCGGCCAGCGCCTG
GGCATCTTCGCTGGCTCGGGCGTCGGCAAGTCGGTGCTGCTGTCGATGCTGGCGAAAGAAGCCACGTGCGACGCCGTCGT
GGTCGGGCTGATCGGCGAGCGGGGCCGCGAGGTCCGCGAGTTCATCGAGGAGACCCTGGGCGAAGAGGGCCTCAAGCGCG
CCATCGTCGTGGTCGCCACCTCGGATGAGCCGGCCCTGACCCGCCGCCAGGCCGCCTACATGACCCTGGCGATCTGCGAG
TATCTGCGCGACCAGGATCAGGAAGTCCTCTGCCTGATGGACTCGGTTACCCGTTTCGCCATGGCCCAGCGCGAGATCGG
CCTGGCCGCCGGCGAGCCGCCGACCACCAAGGGCTACACCCCCACCGTGTTCACCGAACTGCCCAAGCTGCTCGAGCGCG
CCGGTCCCGGCCCGATCCGCGCCGACGGCACCACGGCCGGCCCGATCACCGCCCTGTTCACGGTGCTGGTCGACGGCGAC
GACCACAACGAACCGATCGCCGACGCCACCCGAGGCATCCTCGACGGCCACATCGTCATGGAACGCGCCATCGCCGAGCG
CGGCCGTTTCCCGGCGATCAACGTGCTCAAGTCCATCAGCCGGACCATGCCCGGCTGCCAGACCCCGGAAGAGCGCGAGG
TGGTCAAGGCGGCCCGCCAGACCATGGCCGCCTATTCCAACATGGAAGAACTGATCCGCATCGGGGCCTATCGCGCGGGG
GCCGATCCGATCATCGACCGCGCCATCCGCCTCAACCCCGCCATCGAAGCCTTCCTCGGCCAGGACAAGGACGAGGCCAC
CAGCCTCGACGACAGCTTCGGCTATCTCGCCCACATCTTGCGGAGTGATGCAGCGTAA

Protein sequence :
MRSLIAAVERIDPLTIFGRVAAVNGLLIEARGGLTRLAVGARVEIDRLAAPPLPAEVVGFRETRALLMPFGPVEGVAPGA
EIKIMPEGAVVRPTKAWLGRIINAFGEPIDGLGPLPQGEVPYPLKTPPPPAHARGRVGERLDLGVRSMNVFTTTCRGQRL
GIFAGSGVGKSVLLSMLAKEATCDAVVVGLIGERGREVREFIEETLGEEGLKRAIVVVATSDEPALTRRQAAYMTLAICE
YLRDQDQEVLCLMDSVTRFAMAQREIGLAAGEPPTTKGYTPTVFTELPKLLERAGPGPIRADGTTAGPITALFTVLVDGD
DHNEPIADATRGILDGHIVMERAIAERGRFPAINVLKSISRTMPGCQTPEEREVVKAARQTMAAYSNMEELIRIGAYRAG
ADPIIDRAIRLNPAIEAFLGQDKDEATSLDDSFGYLAHILRSDAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscN AAO18044.1 LscN Virulence TTSS locus Protein 2e-81 47
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 3e-70 47
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 5e-70 46
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 9e-70 46
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 9e-70 46
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 7e-70 46
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-76 44
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-76 44
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 5e-69 44
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 5e-69 44
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 8e-76 43
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-75 43
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 8e-76 43
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-74 43
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 2e-68 43
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 2e-75 42
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 4e-75 42
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 6e-75 42
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 1e-65 42
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 3e-68 42
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 4e-68 42
escN YP_003236088.1 translocator EscN Virulence LEE Protein 4e-69 42
escN AAC38383.1 EscN Virulence LEE Protein 2e-68 42
escN AAC31513.1 L0034 Virulence LEE Protein 1e-68 42
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 1e-68 42
escN NP_290268.1 hypothetical protein Virulence LEE Protein 1e-68 42
ECs4568 NP_312595.1 EscN Virulence LEE Protein 1e-68 42
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 6e-64 41
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 6e-63 41
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 6e-63 41
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 4e-70 41
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 2e-70 41
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 5e-71 41
escN YP_003223475.1 translocator EscN Virulence LEE Protein 1e-68 41
escN CAI43874.1 EscN protein Virulence LEE Protein 8e-69 41
escN AAK26715.1 EscN Virulence LEE Protein 2e-68 41
escN AAL57542.1 EscN Virulence LEE Protein 2e-68 41
escN CAC81862.1 EscN protein Virulence LEE II Protein 2e-68 41
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 3e-68 41
unnamed AAL06369.1 EscN Virulence LEE Protein 2e-67 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliI YP_001682651.1 flagellum-specific ATP synthase VFG2144 Protein 9e-85 47
fliI YP_001682651.1 flagellum-specific ATP synthase VFG1254 Protein 4e-78 47
fliI YP_001682651.1 flagellum-specific ATP synthase VFG2499 Protein 1e-84 47
fliI YP_001682651.1 flagellum-specific ATP synthase VFG0048 Protein 3e-79 46
fliI YP_001682651.1 flagellum-specific ATP synthase VFG2331 Protein 8e-79 46
fliI YP_001682651.1 flagellum-specific ATP synthase VFG0515 Protein 3e-70 46
fliI YP_001682651.1 flagellum-specific ATP synthase VFG0390 Protein 4e-78 46
fliI YP_001682651.1 flagellum-specific ATP synthase VFG0192 Protein 2e-77 45
fliI YP_001682651.1 flagellum-specific ATP synthase VFG0812 Protein 6e-69 42
fliI YP_001682651.1 flagellum-specific ATP synthase VFG0730 Protein 1e-68 42