|
Name : HM1_0258 (HM1_0258) Accession : YP_001678888.1 Strain : Heliobacterium modesticaldum Ice1 Genome accession: NC_010337 Putative virulence/resistance : Virulence Product : type ii/iv secretion protein Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 520648 - 521907 bp Length : 1260 bp Strand : - Note : - DNA sequence : ATGGCAGGGAGCGAAAAAGGCATCATCGTACCGTCTCGAAGGCCTGATAGCGCCTTCGGCGACCGGGATGATGCAACCGA GGGATGGAGTCAGCTTTCTGTCGTTGAACTGGTCGAGGAGATGATCCTGCGGGCGGCCCGGGAGCGGGCCACAGACATCC ATATTGATCCGATGGAGACGAAAAGTCGGGTGCGCTTTCGCGTCGACGGGTTGCTTCGCGATGAGCAGCTGTTGCCGAAA GGGCTGCACGGGCAGGTGGTCTCTCGGATCAAGGTCCTGGCCGGCATGGACATCGCCCGGCGGCGGATCGCACAGGATGG CCGGATTCAGGTCACCATGCCGGACAAGCAGATCGACCTGCGTGTATCGACGCTTCCGACGCTTTTCGGCGAAAGATGCG CCCTCCGGATGTTAGATAAGAAACAGGCGCCGCTGAACCTTGATCAACTGGGATTTCTGCCGGACGCCCTGGCAGCCTTT CAGGCCTTGATGGGCAACGCCTACGGCATGATCCTGGTGACGGGACCCACGGGGGCCGGCAAGACGACGACCTTGTACGC GGCGGTGAACGCCGTCAAGAGCCCCGAAAAAAACATCATCACCATCGAAGACCCGGTGGAGTACATCCTGAGCGGCATCA ACCAGGTGCAGGTCAATGCCAAATCGGGCATCGATTTCACGGAAGGGTTGCGGGCGATTTTGCGCCATGATCCTGACGTG ATCCTGATCGGGGAGATTCGGGACAAAGAAACAGCCGACATCGCCGTCAAGGCGGCGACGACAGGCCATCTCGTTTTTTC GACGTTGCATACAGGCGATGCCGCCGAGGCGGCAGGTCGGCTCATCGATATGGGGGTGGAGCCCTTTCTCGTGGCTTCCG CCGTCTCCGGCATCGTGGCCCAACGGCTGGTTCGGCGGATCTGCCGCTCTTGCAAGACGAGCTACCATCCGCCTCGGTCC TCGCCGGAGCGGATCTTCCTGGAGAAGGCGGGGATGCAAACAGACATCCTTTACAGAGGCGCCGGCTGCAACCGGTGCAA CCAGACAGGTTTTGACGGGCGACTGGCCATCCATGAGGTGATGGTCGTCCGTTCGAGCTTGCGAGAACTGATCATCGCGA AAGCCAGCACCGAAGCCATCCGGGCGAAGGCGGTCGAAGCAGGCATGATCGGACTGGTCGCTGATGGGCTGGCAAAAGCG ATCTTAGGGGAGACGACGGTGCAGGAAGTCATGCGGGTCGCCTTTCGGATGGACGGCTAA Protein sequence : MAGSEKGIIVPSRRPDSAFGDRDDATEGWSQLSVVELVEEMILRAARERATDIHIDPMETKSRVRFRVDGLLRDEQLLPK GLHGQVVSRIKVLAGMDIARRRIAQDGRIQVTMPDKQIDLRVSTLPTLFGERCALRMLDKKQAPLNLDQLGFLPDALAAF QALMGNAYGMILVTGPTGAGKTTTLYAAVNAVKSPEKNIITIEDPVEYILSGINQVQVNAKSGIDFTEGLRAILRHDPDV ILIGEIRDKETADIAVKAATTGHLVFSTLHTGDAAEAAGRLIDMGVEPFLVASAVSGIVAQRLVRRICRSCKTSYHPPRS SPERIFLEKAGMQTDILYRGAGCNRCNQTGFDGRLAIHEVMVVRSSLRELIIAKASTEAIRAKAVEAGMIGLVADGLAKA ILGETTVQEVMRVAFRMDG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-86 | 47 |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-86 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HM1_0258 | YP_001678888.1 | type ii/iv secretion protein | VFG2048 | Protein | 5e-86 | 47 |
| HM1_0258 | YP_001678888.1 | type ii/iv secretion protein | VFG0182 | Protein | 2e-80 | 47 |
| HM1_0258 | YP_001678888.1 | type ii/iv secretion protein | VFG2426 | Protein | 2e-76 | 45 |
| HM1_0258 | YP_001678888.1 | type ii/iv secretion protein | VFG0233 | Protein | 2e-80 | 45 |
| HM1_0258 | YP_001678888.1 | type ii/iv secretion protein | VFG1876 | Protein | 3e-79 | 43 |
