Gene Information

Name : HM1_0430 (HM1_0430)
Accession : YP_001679058.1
Strain : Heliobacterium modesticaldum Ice1
Genome accession: NC_010337
Putative virulence/resistance : Resistance
Product : abc transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 356314 - 356982 bp
Length : 669 bp
Strand : +
Note : -

DNA sequence : 
TTGATAGAAATGAATGCCGTCGGAAAATCCTTCCCCTTCGGCGCCAGTCCTTTGCAGGTGCTCTCCGGCATCGACCTGAC
TGTTGCCTCAGGGGAGTTTCTGGCTGTCATGGGCCCTTCGGGGAGCGGCAAGTCGACGCTGATGAACCTCATCGGCTGCA
TGGACCGTCCCAGCGAAGGGCAATACCGGCTGGCCGGACAGGAGACGGCCCGCCTCACCGAAAAAGAACTCTGCCGCCTG
CGCAACGCCATGGTGGGCTTTGTCTTCCAGTCATTCCACCTGCTCCCGCGCCTGACGGCCTGGCGGAACGTGGAGACACC
CCTCTTCTACGCCGGCGTCGCTCCGGAAGAACGACGCCGCCGGGCGAAGGAGCTGTTGGAACGGGTCGGCCTCGGCCACC
GGCTGCATCACCGGCCCACAGAGCTCTCTGGCGGTGAACGGCAGCGTGTCGGCATCGCCCGGGCGCTGGCCAACGATCCT
GCCCTGATCCTGGCCGATGAGCCAACAGGCAACCTGGACCAACAGACCGGGCAGGAGATCCTCGAACTGTTCGCAGCCCT
GCGCCGGGAAGGCAAGACGATCGTCATGGTCACCCACGACCCCGATGTGGCGAAGTGGGCCGACCGGGTCGTCCGAATTA
AGGATGGGAAGCTCTGTGCAACTGCGTGA

Protein sequence : 
MIEMNAVGKSFPFGASPLQVLSGIDLTVASGEFLAVMGPSGSGKSTLMNLIGCMDRPSEGQYRLAGQETARLTEKELCRL
RNAMVGFVFQSFHLLPRLTAWRNVETPLFYAGVAPEERRRRAKELLERVGLGHRLHHRPTELSGGERQRVGIARALANDP
ALILADEPTGNLDQQTGQEILELFAALRREGKTIVMVTHDPDVAKWADRVVRIKDGKLCATA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-26 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-27 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-27 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-27 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HM1_0430 YP_001679058.1 abc transporter NC_012469.1.7686878. Protein 5e-56 55
HM1_0430 YP_001679058.1 abc transporter NC_008702.1.4606598. Protein 7e-48 52
HM1_0430 YP_001679058.1 abc transporter CP001581.1.gene798.p Protein 6e-36 41