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Name : hsdR (HM1_3070) Accession : YP_001681587.1 Strain : Heliobacterium modesticaldum Ice1 Genome accession: NC_010337 Putative virulence/resistance : Unknown Product : type i site-specific deoxyribonuclease, hsdr family Function : - COG functional category : V : Defense mechanisms COG ID : COG0610 EC number : - Position : 3016919 - 3020122 bp Length : 3204 bp Strand : - Note : - DNA sequence : ATGTCGCAACACCAGGCGTTCTGCGAATCGGAACTGGAAGAGGCCGCCCTGGAATGGTTTCAGGAACTGAACTATGAAAC CGCCTTCGCCCCCGAACTCTCGCCGGGCGGCGATTACCCGGAACGGGAAGACTATGGCGACGTCATCCTCCAGGATCGGT TGCGAGACGCGCTCCAGCGGATCAACCCGCACCTGCCTCCCGAAGCCATCGAGGACGCCTACCGGCAGATCGCCATCCCC CAGAGCCCGAGCCTGCTCATGAACAACAAGGCCTTCCACAAGCTGATCACCGACGGGATCGACATAAGTTACCGCCACAA AGGCGGCGCTGTCCGCTATGCAAAAGCCATGGTCTTCGATTTTGACCCCTGCCGTGTTGATAATAACGACTGGCTCGTCG TCAACCAGTTCACCGTCATCGAAAACCGGGTGGAGAAACGGCCCGACATGGTCGTCTTCGTCAACGGCATCCCCCTCGTC GTCATCGAACTGAAGAGCAGTTCCGATGAAGAGGTCGGCATCAGCGAAGGCTTCAACCAACTACAGACCTACAAGCAGAC CATCCCCTCGCTCTTTACATATAACGCCTTCATGGTGACGAGCGACGGGATCAACGCCAGGGCAGGGACGCTGACGGCTG ATGAAGACCGCTTCATGATGTGGCGGACCATCGACGGCGACGATGTGGCGCCATTGTCGATCCCCCAACTGGAAGTCCTA ATTAAAGGCATGTTCGACAAGCGCCGGCTCCTCGACATCGTCAGGCACTTCATCACCTTCCAGACCGATGGCCGCGATAC CTACAAGCTCCTGGCGGGCTATCACCAGTACCATGCCGTCAACAAAGCCGTCGACAGCACCGTCCGGGCGACGTTAGAAA AGGGCGACCGTCGGATTGGCGTCATATGGCACACGCAAGGTTCCGGCAAGAGTCTTTCCATGGTCTTTTACACCGGTAAA TTGGTTCTGGCAGAGGAGTTGGACAATCCGACCATCGTCGTCATCACTGACCGCAATGATTTAGACGATCAACTCTTCGG CGCCTTCGCCCGTTCAAAAGACCTGCTTCGGCAGACGCCGGTGCAAGCGAAAGACCGGGCCGATCTGCGCCGCCTCTTGG AGCGGGAGGCCGGCGGGATCATCTTCACCACCATCCACAAATTCGCCCCCGAAGCCAAGGGTGATCGCATCCCCGTGTTG ACAGACCGAAAAAATGTCATCGTCATCGCCGACGAGGCCCACCGCAGCCAGTACGGCTTCGGCGCCGATGTGGTGGAAGG AAAAGACGAAGCGGACATCAAATACGGCTACGCCAAATATATGCGCGACGCCCTGCCCAACGCCTCCTACATCGGCTTTA CCGGCACGCCCATCGAACTGACCGATAAGAACACCCGCGCCGTCTTCGGCGATTACATCGACATCTATGACATGACCCGC GCCGTTGAAGACGGCACCACCGTCAAGATCTACTACGAGAGCCGCATCGCCAAGCTCGACCTGCCCGACGAGATGAAGCC CGTCGTCGATGAGGAATACGAAGAGATCACCGAACATCAGGAATACGAGCAAAAAGAAAAGCTGAAGTCCAAGTGGTCCC GCCTGGAAGCCATCGTCGGCGCCGACGAGCGGATCCAGGTGGTGGCCCGAGACATCGTCGAGCACTTCGAGAAACGTCAG GCCGCCCAGGAGACCGCCGTCGGCAAAGCCATGATCGTCGTCATGTCCCGGCGCATCGCCGTCGACCTGTATCATGCCAT CGTCACCCTCCGTCCCGAATGGCACAGCGATGATCTAGACAGAGGCGTCATCAAGGTGGTCATGACGGGGGGCTCCGCCG ACCCGAAGGAATGGCAGCCCTTCATCGGTACGAAGGCCACTCGTGATCGCCTCGCCAAGCGCATGAAAGACAACGATGAT GAACTGAAACTGGTCATCGTCCGCGACATGTGGCTCACCGGCTTCGACGTGCCCAGCATGCACACCATGTACATCGATAA GCCTATGGGCGGCCACAACCTGATGCAGGCCATAGCTAGGGTCAACCGCGTCTTTCGGGAAAAGCAGGGCGGCTTAGTCG TCGACTACATCGGCATCGCTGAGAACCTGAAAGCCGCCTTGCGAGATTACACGGAAAGCGACAAGCAGACGACCGGCGTC GACACGGACCAGGCGGCGGAGGTCATGCTGGAGAAGTATGACCTGATCCAAGAGATGCTTCACGGCCACGACTACAGCAA GTTTTTCACAGGCAAAGCCAGCGACCGCATGCAGGCCATCGTCGAAACGATCGACTTCGTCATCGGGCTCCGTGAGCGCA AAGATGAATACATGCGCCTCGTCACGGAACTGTCCAAGGCCTACTCCCTCTGCGCCACCACCGACGCGGCAGAAAAGCTC AACTTGGAAGTGGGCTTCCACAAGGCCGTCAAAGCGGGCATCATCAAGATGATCCCGGAGAACACAAAAAAGAGAACAGG CGCCCACTTGGACGCCCAGTTAAACCAGTTGATCTCCAAGTCGATCTCCTCGAACGAGGTCATCGACATCCTGCAGGCCG TAGGCCTGCAAAAGCCCAACATCGCCATCCTGTCCGATGAGTTCCTTGAAGAAGTGCGGGTGATGAAGCAGAAAAACCTG GCTGTCGAACTACTCAACCGCCTGCTCAAAGGCAAGGTCAAAGCCTTCGCTCGCAAGAACCTGATCCTTTCTAAAAAGTT TTCCGAAATGCTGGAACAGGCCATCAAGAAGTACCAGAACCGTACCATTGAGACGACCCAGGTGATCATCGAACTGATCG AACTGGCCAAAGAAGTGAACAAGGCTCATGGCCGGGGTGAAAACACGGGCCTGACCGAAGACGAATTGGCCTTCTATGAC GCCTTAGCCGACAATGAATCGGCGAGAGAACTCATGGGCGACGAGATCCTCAAACAAATCGCCAGGGATCTGACCCAGCA GATCAAGCGGAACATGACCGTCGACTGGAGCCTGAGAAGCAGCGTCCAGGCAAGAATGAAGATGATCATCAAGCGGCTGT TGAAGAAATACAACTACCCCCCGGACAATCGCGAGAAAGCCCTGTCCACCGTCATGGAACAGGCGCGGTTGCTCTGTGTC AGCGAGGCAGCAGCCCTGAACAGCGGCGACCAGGTTTCCGAACTGAGAGTAGCGGAAAGACTGGATCATCGCTACGAGGT CTAA Protein sequence : MSQHQAFCESELEEAALEWFQELNYETAFAPELSPGGDYPEREDYGDVILQDRLRDALQRINPHLPPEAIEDAYRQIAIP QSPSLLMNNKAFHKLITDGIDISYRHKGGAVRYAKAMVFDFDPCRVDNNDWLVVNQFTVIENRVEKRPDMVVFVNGIPLV VIELKSSSDEEVGISEGFNQLQTYKQTIPSLFTYNAFMVTSDGINARAGTLTADEDRFMMWRTIDGDDVAPLSIPQLEVL IKGMFDKRRLLDIVRHFITFQTDGRDTYKLLAGYHQYHAVNKAVDSTVRATLEKGDRRIGVIWHTQGSGKSLSMVFYTGK LVLAEELDNPTIVVITDRNDLDDQLFGAFARSKDLLRQTPVQAKDRADLRRLLEREAGGIIFTTIHKFAPEAKGDRIPVL TDRKNVIVIADEAHRSQYGFGADVVEGKDEADIKYGYAKYMRDALPNASYIGFTGTPIELTDKNTRAVFGDYIDIYDMTR AVEDGTTVKIYYESRIAKLDLPDEMKPVVDEEYEEITEHQEYEQKEKLKSKWSRLEAIVGADERIQVVARDIVEHFEKRQ AAQETAVGKAMIVVMSRRIAVDLYHAIVTLRPEWHSDDLDRGVIKVVMTGGSADPKEWQPFIGTKATRDRLAKRMKDNDD ELKLVIVRDMWLTGFDVPSMHTMYIDKPMGGHNLMQAIARVNRVFREKQGGLVVDYIGIAENLKAALRDYTESDKQTTGV DTDQAAEVMLEKYDLIQEMLHGHDYSKFFTGKASDRMQAIVETIDFVIGLRERKDEYMRLVTELSKAYSLCATTDAAEKL NLEVGFHKAVKAGIIKMIPENTKKRTGAHLDAQLNQLISKSISSNEVIDILQAVGLQKPNIAILSDEFLEEVRVMKQKNL AVELLNRLLKGKVKAFARKNLILSKKFSEMLEQAIKKYQNRTIETTQVIIELIELAKEVNKAHGRGENTGLTEDELAFYD ALADNESARELMGDEILKQIARDLTQQIKRNMTVDWSLRSSVQARMKMIIKRLLKKYNYPPDNREKALSTVMEQARLLCV SEAAALNSGDQVSELRVAERLDHRYEV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 56 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 55 |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 55 |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 0.0 | 49 |
