Gene Information

Name : polA (HM1_2936)
Accession : YP_001681456.1
Strain : Heliobacterium modesticaldum Ice1
Genome accession: NC_010337
Putative virulence/resistance : Unknown
Product : DNA polymerase i
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0749
EC number : -
Position : 2884739 - 2886679 bp
Length : 1941 bp
Strand : +
Note : -

DNA sequence :
GTGAGGGCGCTCAATATCGACATAGAAACGTACAGCAGTGTAGACCTCGCCAAAAGCGGGGTCTATCGCTATACGGAATC
CCCGGACTTTGCAATCCTGCTCTTCGGATATTCCGTTGATGGCGGCGAGGTTCAGGTGGTTGACCTCATGTGTAGCGAAG
CAATCCCATCCAAAGTCGTCGATGCACTAACCGATAAGGATGTGACGAAGTGGGCTTTCAACGCCCAGTTTGAACGCATC
TGCTTGTCAAAGTGGTTAGGGTTGCCCACAGGTCAATATCTTGATCCAATGTCATGGCGCTGCACGATGGTGTGGTCGGC
ATACATGGGCCTGCCCCTCTCCCTTGAAGGAACCGGCGCCGTCCTTGGCCTTGAAAAGCAGAAGCTCACGGAGGGCAAAG
ACTTAATTCGGCATTTTTCTGTGCCGTGCAAACCTACAGTCTCCAATGAAGGCCGTACAAGAAACCTGCCAATCCACGCC
CCGGACAAATGGGCTGCATTCAAGGCCTACAACCTTCGCGATGTTGAAACTGAGATGGCGATACAGCAGAAGCTGGCTAA
GTTTCCCGTACCCGAGGGCGTTTGGGGGGAATACCACCTCGATCAAGAGATTAACGACCGTGGCGTTGCTCTGGATATGG
ATCTCGTGCGTCAAGCCATCGAAATGGATAACCGATCCCGTTCCAAACTGACTGGCATGATACGTGAATTGACTGAGCTG
GAGAATCCCAACTCCGTGGTTCAGATGAAGCAGTGGCTTTCCGACCACGGCCTTGAAACCGATACGCTTGGCAAGAAGGC
TGTGGTGGAACTTTTAAAGACTGCATCAGAACCGCTCGGTAAGGTGTTGGAACTCAGGCAGTCACTGGCAAAGTCATCGG
TCAAGAAATATACGGCCATGGAAAACGTAGTCTGCACCGACGGTCGCGCCCGTGGAATGTTCCAATTTTACGGCGCCAAC
CGAACCGGCAGATGGGCAGGCAGATTAATACAATTGCAGAACCTGCCCCAGAACCACATGCCCGACCTGGAACAGGCCCG
AAGCCTTGTGCGTTCCGGCAACTTCGCAGCTTTGGAAATGCTCTACGACTCAGTGCCGGAGGTACTGTCGGAACTCATCC
GTACCGCCTTTGTGCCGAAAAAAGGCTGTAAATTCATCGTGGCGGACTTCTCGGCGATTGAAGCGAGGGTCATCGCCTGG
CTTGCGGGCGAAAAATGGCGGCAGGAGGTCTTTGAATCCGGCGGCGATATCTACTGTGCTTCCGCTTCCCAGATGTTCCA
TGTTCCTGTGGAAAAGAACGGTGTCAACGGCCACCTGCGGCAAAAAGGCAAAATCGCGGAACTCGCCCTCGGATACGGCG
GGTCGGTCGGTGCGCTCAAAGCTATGGGCGCATTGGAGATGGGGCTTGAAGAGGAGGAACTTCAACCACTTGTTTCCGCC
TGGAGATCCTCGAACCCCAAAATCGTGAGACTCTGGTGGGATATTGACCGTGCCGCCATGAAGGCAGTCAGGGAGCGCAC
CACCACAGAAACACACGGCATCCGCTTTTCCTATCAGAGCGGGATGTTCTTTATAACGCTCCCTTCCGGCAGGCGTCTTG
CCTATGTGAAGCCGCGTATTGGTCAGAACCGCTTCGGTTCGGACTGCATCACCTACGAAGGTGTCGGCGGCGCAAAGAAA
TGGGAACGGATTGAAAGCTATGGCCCGAAACTCACGGAAAATATCGTGCAGGCCACGAGCCGGGACATCCTCTGCTATGC
CATGCGGAATCTTAGGCACTGCTCCATCGTGATGCACGTTCACGATGAGATTGTTATCGAAGCTGACCGCCGAATGTCCA
CCGAGGCTGTATGCAAACAAATGGGCCAAACACCACCCTGGGCAAAAGGCCTTTTACTGCGGGCGGATGGATATGAAACA
GATTTTTACAAAAAAGATTGA

Protein sequence :
MRALNIDIETYSSVDLAKSGVYRYTESPDFAILLFGYSVDGGEVQVVDLMCSEAIPSKVVDALTDKDVTKWAFNAQFERI
CLSKWLGLPTGQYLDPMSWRCTMVWSAYMGLPLSLEGTGAVLGLEKQKLTEGKDLIRHFSVPCKPTVSNEGRTRNLPIHA
PDKWAAFKAYNLRDVETEMAIQQKLAKFPVPEGVWGEYHLDQEINDRGVALDMDLVRQAIEMDNRSRSKLTGMIRELTEL
ENPNSVVQMKQWLSDHGLETDTLGKKAVVELLKTASEPLGKVLELRQSLAKSSVKKYTAMENVVCTDGRARGMFQFYGAN
RTGRWAGRLIQLQNLPQNHMPDLEQARSLVRSGNFAALEMLYDSVPEVLSELIRTAFVPKKGCKFIVADFSAIEARVIAW
LAGEKWRQEVFESGGDIYCASASQMFHVPVEKNGVNGHLRQKGKIAELALGYGGSVGALKAMGALEMGLEEEELQPLVSA
WRSSNPKIVRLWWDIDRAAMKAVRERTTTETHGIRFSYQSGMFFITLPSGRRLAYVKPRIGQNRFGSDCITYEGVGGAKK
WERIESYGPKLTENIVQATSRDILCYAMRNLRHCSIVMHVHDEIVIEADRRMSTEAVCKQMGQTPPWAKGLLLRADGYET
DFYKKD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SEQ_2073 YP_002747288.1 phage DNA polymerase Not tested ¥ÕSeq4 Protein 6e-154 53
MW1425 NP_646242.1 DNA polymerase Not tested ¥ÕSa2 Protein 2e-140 49
polA YP_494120.1 phage related DNA polymerase family A Not tested ¥ÕSa2 Protein 1e-139 49