Gene Information

Name : HM1_2862 (HM1_2862)
Accession : YP_001681382.1
Strain : Heliobacterium modesticaldum Ice1
Genome accession: NC_010337
Putative virulence/resistance : Unknown
Product : DNA recombinase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1961
EC number : -
Position : 2815262 - 2816836 bp
Length : 1575 bp
Strand : -
Note : -

DNA sequence :
TTGGCGGCAGCAAAAACCGTGTCGGTAATACCGGCAAAACCGAAGCAGAATAGAACTGCAGAGGCTAATGCCAGGCAAAA
GCTGCGGGTAGCGGCCTACTGCAGGGTTTCCACTGACAATGAAGAGCAGGCGTCCAGTTATGAAGTGCAGATAGAGCATT
ATACCAGATACATCCAAAGCAATCCGGAGTGGGAACTGGCCGGAATTTTTGCGGATGAAGGCATTACCGGAACAAATACG
AAGAAAAGAGCGGAATTTAACCGCATGATCGAGGAATGCATGGCTGGCAGAATTGACATGGTGATAACCAAGTCCATCAG
CCGCTTTGCCCGGAATACCCTCGATTGCTTGAAATACATACGCCAGTTGAAGGACAAGGGCATACCGGTGTTTTTCGAGA
AGGAAAACATTAACACCATGGACAGCAAGGGAGAAATCCTTTTGACTATCATGGCAAGCCTTGCGCAGCAGGAAAGCCAG
TCGCTCAGCCAGAATGTCAGGATGGGCATTGCATTTCGGTTTCAAAACGGCGAGATACAGGTAAACCATAACCGGTTCTT
AGGTTATACAAAGGATGAAAACAAACGGCTGGTTATTGTTCCCGAGGAAGCGGAAATCGTCAAACGCATTTATCGGGAGT
TTCTTGAGGGCGCGAGCCTTCTGCAGATAGGCCGTGGCCTTGAAGCTGACGGCATTCTTACCGCCGCAGGCAAACCTAAA
TGGCGGCCGGAAACTATCCGAAAGATACTCAAAAACGAGAAGTACATTGGGGACGCTCTTTTGCAAAAGACTTATACAGT
GGATTTCCTTTCCAAGAAGCGGGTTATTAATAACGGCATCGTGCCGCAGTATTATGTAGAAAACAGCCACGAGCCGATCA
TTCCGCGGGAGCTTTTTTTGCAGGTACAGGAGGAGCTGGCAAGACGGGCAAACCTTCGGAGCGGCGAGAAAGGCGGCAAG
CGCGTTTACAGTTCCAAATATGCTCTGTCGAGTATTGTTTTTTGCGGAGAGTGCGGTGAAATTTACCGCAGGGTGCATTG
GAACAACCGCGGCAAAAAGTCCATAGTTTGGCGGTGCGTAAGCAGGCTGGAGGAAAAAGGTTCTGACTGCGGCTCGCCGA
CTGTATCAGAGGAAGACTTGCAGAAAGCAGTGCTCAAGGCTATCAACAGCATAATTGCCGGGCGTGATGAGTTTATTGAA
ACTCTCCGCAGGAACATTGAAACGGCGTTGGGCGGGGAGTTTGACGAAAGCACGGAAGCTATAGATAAAAAGCTTGAAGA
ACTGCAGCATGAACTCTTGCGGCTTGCCAGCACAAAAGCAGCCTATGACAGTGTGGCAAACGAAATATACCGATTGCGGG
AGCTGCGTCAGGAAACATTGGCCAGCAACTCTGAGCGGCAGAACAAGCGGCAGCGGATTGCAGAGATGATGGATTTTTTG
GAAAGCCAGAGCGGCGTTATTTTTGAATATGATGAAAAGTTGGTTAGATGGCTGGTGGAGAAAGTCACTGTGTTTGAAGG
CGGGATAGTGGTGAAATTTAAGACTGGCATTAGTGTGGAACTGGATTATAGGTAA

Protein sequence :
MAAAKTVSVIPAKPKQNRTAEANARQKLRVAAYCRVSTDNEEQASSYEVQIEHYTRYIQSNPEWELAGIFADEGITGTNT
KKRAEFNRMIEECMAGRIDMVITKSISRFARNTLDCLKYIRQLKDKGIPVFFEKENINTMDSKGEILLTIMASLAQQESQ
SLSQNVRMGIAFRFQNGEIQVNHNRFLGYTKDENKRLVIVPEEAEIVKRIYREFLEGASLLQIGRGLEADGILTAAGKPK
WRPETIRKILKNEKYIGDALLQKTYTVDFLSKKRVINNGIVPQYYVENSHEPIIPRELFLQVQEELARRANLRSGEKGGK
RVYSSKYALSSIVFCGECGEIYRRVHWNNRGKKSIVWRCVSRLEEKGSDCGSPTVSEEDLQKAVLKAINSIIAGRDEFIE
TLRRNIETALGGEFDESTEAIDKKLEELQHELLRLASTKAAYDSVANEIYRLRELRQETLASNSERQNKRQRIAEMMDFL
ESQSGVIFEYDEKLVRWLVEKVTVFEGGIVVKFKTGISVELDYR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
smi_1713 YP_003446815.1 site-specific recombinase Not tested The aminoglycoside resistance gene cluster Protein 0.0 74
SSU05_0953 YP_001198319.1 DNA recombinase Not tested 89K Protein 5e-158 63
SSU98_0960 YP_001200518.1 DNA recombinase Not tested 89K Protein 5e-158 63